CX299955

Overview
NameCX299955
Unique NameCX299955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.622e-34
Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWI 471
            +GYR+ IYSGDHDM +P+ GTEAW +SL Y ++D WRPW L+ QV+GYT+ Y + +T+AT+KG GHT PEY+P E  A + RW+
Sbjct:  422 QGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWL 505          

HSP 2 Score: 38.891 bits (89), Expect = 8.622e-34
Identity = 18/50 (36.00%), Postives = 29/50 (58.00%), Query Frame = 2
Query:   71 LARYWDNDHNVRKALHIRQGSK-GEWIRCNYDLPYTHEIGNSFSYHVSLS 217
            +A  W N+ +VR A+H +  S  G W+ C   L + H+ G+  SYH +L+
Sbjct:  371 VATAWLNNDDVRAAIHAQPVSSIGSWLICTNVLDFIHDAGSMISYHKNLT 420          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 127.487 bits (319), Expect = 1.463e-33
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWI 471
            +GYR++I+SGDHDM +PF G+EAW KSL Y +VD WRPWI + QV+GYT  Y + +T+AT+KG GHT PEY+P E +A + RW+
Sbjct:  411 QGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWL 494          

HSP 2 Score: 35.4242 bits (80), Expect = 1.463e-33
Identity = 16/52 (30.77%), Postives = 30/52 (57.69%), Query Frame = 2
Query:   71 LARYWDNDHNVRKALHIRQGSK-GEWIRCNYDLPYTHEIGNSFSYHVSLSTK 223
            +A  W ++  VR A+H +  S  G W+ C   L + H+ G+  +YH +L+++
Sbjct:  360 VATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGSMIAYHKNLTSQ 411          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-33
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  223 GYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWI 471
            GYR+LIYSGDHDM +PF G+EAW KSL Y ++D+WR WI + QVAGYT+ Y+N +T+ T+KG GHT PEY+P E    + R++
Sbjct:  410 GYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYANNLTFLTIKGAGHTVPEYKPREALDFYSRFL 492          

HSP 2 Score: 39.6614 bits (91), Expect = 5.481e-33
Identity = 17/50 (34.00%), Postives = 30/50 (60.00%), Query Frame = 2
Query:   71 LARYWDNDHNVRKALHIRQGSK-GEWIRCNYDLPYTHEIGNSFSYHVSLS 217
            +A  W ND  +RKA+H ++ S+ G W  C+  L + H+ G+   +H +L+
Sbjct:  358 VATAWLNDPEIRKAIHTKEESEIGRWELCSGKLSFYHDAGSMIDFHRNLT 407          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 7.692e-32
Identity = 43/83 (51.81%), Postives = 66/83 (79.52%), Query Frame = 1
Query:  223 GYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWI 471
            G+R+LI+SGDHDM +P+ G+EAW K++ Y +VD+WRPW+ ++QVAG+T+ Y+N +T+ T+KG GHT PEY+P E    + R++
Sbjct:  407 GFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYANNLTFLTIKGAGHTVPEYKPRESLDFYSRFL 489          

HSP 2 Score: 41.2022 bits (95), Expect = 7.692e-32
Identity = 19/50 (38.00%), Postives = 29/50 (58.00%), Query Frame = 2
Query:   71 LARYWDNDHNVRKALHIRQGSK-GEWIRCNYDLPYTHEIGNSFSYHVSLS 217
            +A  W ND  VRKA+H ++    G W  C+ +L Y H+ G+   YH +L+
Sbjct:  355 VATKWLNDPAVRKAVHAKEEKAIGNWELCSSNLEYRHDTGSMIEYHRNLT 404          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 486
            +G R L+YSGD D  IPF  T A +K++N ++V++WRPW    Q+ G+T  Y   +TYATVKG GH+ P  +P     +F  +I + PL
Sbjct:  395 EGVRVLVYSGDVDAAIPFTATMAVLKTMNLTVVNEWRPWFTGGQLGGFTEDYERNLTYATVKGSGHSVPLDQPVHALNLFTSFIRNTPL 483          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 486
            KG R ++Y+GD D++IPF  T A +K++N ++V +WRPW     V G+T  Y   +T+ TVKG GH+ P  +P     +F  +I + PL
Sbjct:  390 KGVRVMLYNGDVDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 478          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 486
            +G R +IY+GD D+ IPF  T A +K +N ++V ++RPW    Q+ G+T  Y   +T+ TVKG GH+ P  +P     +F  +I + PL
Sbjct:  395 EGVRVMIYNGDVDLEIPFASTLAVVKEMNLTVVKEFRPWFTGGQLGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 483          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  220 KGYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 486
            +G R  ++SGD D  IP   T+  +K +N +    W PW L  +V GYT  Y  ++T+ATV+G GH  P ++P    ++F  ++N  PL
Sbjct:  408 QGVRVWVFSGDTDGRIPVTSTKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGKLTFATVRGAGHQVPSFQPKRSLSLFIHFLNDTPL 496          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  229 RSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 486
            R  +Y+GD D +IP   T   +K +N + V DW PW    QV G+T  Y     YATV G GH  P Y+P     +F+ +I + PL
Sbjct:  412 RVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRYATVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
BLAST of CX299955 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.612e-13
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
Query:  181 NWQ*FFLSCKPQYK-----GYRSLIYSGDHDMIIPFLGTEAWIKSLNYSIVDDWRPWILHSQVAGYTRTYSNQMTYATVKGGGHTAPEYRPAECYAMFQRWINHDP 483
            NW     S  P YK     G+R  +YSGD D  +P L T   I  L   I   WRPW   +QV+G+ + Y   +T+AT +G GH  P ++P+E  A F  ++N  P
Sbjct:  354 NWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYEG-LTFATFRGAGHDVPSFKPSESLAFFSAFLNGVP 458          
The following BLAST results are available for this feature:
BLAST of CX299955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CBP1_ORYSJ8.622e-3457.14Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
CBP1_HORVU1.463e-3358.33Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP20_ARATH5.481e-3357.83Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP21_ARATH7.692e-3251.81Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP38_ARATH6.361e-1843.82Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP36_ARATH4.123e-1740.45Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP37_ARATH3.859e-1539.33Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP40_ARATH5.572e-1437.08Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP39_ARATH7.278e-1439.53Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP32_ARATH3.612e-1337.74Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC07004D08SK SaltLeaf1 Citrus clementina cDNA clone C07004D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299955 ID=CX299955; Name=CX299955; organism=Citrus clementina; type=EST; length=660bp
AGCAATCTCAAGAATTCCTTAATCCTGAACAACATTTCCTCCGATTGGCT
GTCGATCTTATGGATATTTGCTCGCTCGCTATTGGGATAATGACCATAAT
GTCCGTAAGGCACTTCATATAAGACAGGGAAGCAAAGGTGAATGGATACG
CTGCAATTATGATTTACCTTATACGCATGAAATTGGCAATAGTTTTTCCT
ATCATGTAAGCCTCAGTACAAAGGCTACCGCTCTTTAATATATAGTGGGG
ACCATGACATGATCATACCATTCCTGGGAACAGAGGCGTGGATAAAATCT
CTCAATTACTCCATTGTTGATGACTGGAGGCCGTGGATTCTCCACAGCCA
AGTTGCAGGGTATACGAGGACTTACTCCAATCAGATGACGTATGCCACTG
TAAAGGGAGGAGGGCACACTGCTCCTGAGTACAGGCCTGCGGAATGTTAT
GCTATGTTTCAAAGATGGATAAATCATGATCCATTGTAGTTGCCTGCAAT
TTCTAGCTAGTATTTGGTCCAAAGTAATCTATATCAATAATTGATCATGT
ATGATCATGTTTCCTCATGTTAGGTATCAGTGTTGACAATAAACAGACAT
TCATGAAAAGCACACATTCATAATAAATGGAAGCTAATTTTACCAAAAAA
AAAAAAAAAA
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