CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GLOVI (Biosynthetic arginine decarboxylase OS=Gloeobacter violaceus GN=speA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.059e-20 Identity = 61/144 (42.36%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVD----GLC----------DFVAKEIG--ASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMF 377 A Q K+ + F G LG+ + A + G C D++ E+ + TY+ N S+F S PD WAI QLFPI+PIH LDE P RG L+DLTCDSDGKID+FI L LH + PYYLGMF Sbjct: 395 ASQFKEEALSLFALGYLGLGERARAERLYWGCCEKILNLVRELDYIPDELADLEKNMASTYYCNFSVFQSAPDSWAIDQLFPIMPIHRLDEEPKARGTLADLTCDSDGKIDQFIDLRDVKGVLELHPV-----RPEEPYYLGMF 533
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA2_SYNY3 (Biosynthetic arginine decarboxylase 2 OS=Synechocystis sp. (strain PCC 6803) GN=speA2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.383e-20 Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 90 DFVAKEIGASDPVRT--YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMF 377 +++ ++ A D + T Y+VNLS+F S P+ W++ QLFPI+PIHHL+E+P R +L+DLTCDSDGKID+FI + L +H + G PYYLGMF Sbjct: 467 EYIPEDFQALDKIMTDIYYVNLSVFQSAPESWSLDQLFPILPIHHLNEKPSQRVILADLTCDSDGKIDRFIDLWDVKSYLEVHPLENDG----NPYYLGMF 563
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_THEEB (Biosynthetic arginine decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=speA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.358e-20 Identity = 48/81 (59.26%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 Y++NLS+F S+PD WAI QLFPI+PIH LDE P RG+L+DLTCDSDGKID+FI + E+ GE PYYLG+F Sbjct: 462 YYINLSVFQSVPDSWAIDQLFPIMPIHRLDEEPTERGILADLTCDSDGKIDQFIDLRDVKSVLELHPFRPGE--PYYLGLF 540
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA1_SYNY3 (Biosynthetic arginine decarboxylase 1 OS=Synechocystis sp. (strain PCC 6803) GN=speA1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.529e-19 Identity = 58/147 (39.46%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 6 DQLKQRCIEQFKDGTLGIEQLATVDGLC--------------DFVAKEIGASDP--VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMV----GGGCGERGPYYLGMF 377 +Q K I F G LG+++ A + L ++V ++ + Y+ N+S+F S PD WAI QLFPI+PIH LDE P RG+L+D+TCDSDGKID+FI + L LH ++ G PYYLGMF Sbjct: 445 EQFKTEAISLFNFGYLGLKERAKAEELYWACCRKILQICRQQEYVPDDLENLEVNLASIYYANMSVFQSAPDSWAIDQLFPIMPIHRLDEEPTQRGILADITCDSDGKIDQFIDLRDVKSVLELHPLIEVHQPGTPPRVEPYYLGMF 591
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SYNR3 (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain RCC307) GN=speA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.607e-19 Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLAT-VDGLCDFVAKEIGASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 A+QL C D G E+L + GL K AS TY+ NLS+F S PD WAI QLFP++PIH L+E+P G +DLTCDSDGK+ +FI G++ PL E+ GE PY++G+F Sbjct: 428 AEQLYWACCSAIADLLPGEEELPDELKGL-----KAAFAS----TYYANLSVFRSAPDTWAIDQLFPVMPIHRLEEQPRELGSFADLTCDSDGKLARFIASGSAKPLLELHELKDGE--PYWIGLF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SYNPX (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain WH8102) GN=speA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.908e-19 Identity = 54/142 (38.03%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGL----CDFVAKEIGASDPVR------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTS---LPLHEMVGGGCGERGPYYLGMF 377 + KQ + F+ G +G+ A+ + L D +A+ + + TY+ NLSIF S PD WAI QLFP+VPI L++RP L+DLTCDSDG++D+FIG G L LHE+ + PY +G+F Sbjct: 410 KFKQDALAAFRLGYMGLPDRASAEQLTWACADAIAQRLPKEQAIPEELAALSKALAGTYYANLSIFRSAPDTWAIDQLFPVVPIQKLNQRPTRLANLADLTCDSDGRLDRFIGDGQPKQLLELHEL-----DDNNPYLIGLF 546
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROMA (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus GN=speA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18 Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGASDP----------------VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 + K+ + F+ G + + + AT + L AK+I A P TY+ N+SIF S PD WAI QLFP++PIH L E+P G +DLTCDSDGK+ +FI G L E+ E Y++GMF Sbjct: 414 KFKEDALNAFRLGFIDLTERATAEQLTWACAKQIAAHLPNDLKIPKELLAINKGLTETYYANISIFRSAPDTWAIQQLFPLLPIHRLQEKPDQLGHFADLTCDSDGKLARFINNGQEKFLLELHTVKANEN--YWIGMF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROMM (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=speA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.765e-18 Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 132 TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 TY+ NLSIF S PD WAI QLFP++PIH L+E P G +DLTCDSDGK+D+FIG G T L LH + + Y +GMF Sbjct: 471 TYYANLSIFRSAPDTWAIEQLFPLMPIHRLNEEPTQLGHFADLTCDSDGKLDRFIGNGQTKTLLELHNL-----RQNEAYMIGMF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROM3 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=speA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 46/85 (54.12%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 132 TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 TY+ NLSIF S PD WAI QLFP++PIH L E P G +DLTCDSDGK+D+FIG G T L LH + + Y +GMF Sbjct: 471 TYYANLSIFRSAPDTWAIEQLFPLMPIHRLKEEPTQLGHFADLTCDSDGKLDRFIGNGQTKTLLELHNL-----RQNEAYMIGMF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOSM (Biosynthetic arginine decarboxylase OS=Geobacter sp. (strain M21) GN=speA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGA----SDPV------------RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGT-SLPLHEMVGGGCGERGPYYLGMF 377 QL Q + F G L + + A + +C + ++I + P+ +TY N S+F SIPD WAI QLFPIVPI LDE+P V ++D+TCDSDG+I F+G G T +LPLH++ YY+G F Sbjct: 401 QLIQESVSLFNLGYLNMAERANAEWICSKIIRKINSIVEKMKPIPDELQNFQLSLRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLDEKPDVLTSIADITCDSDGEITSFVGENGRTKALPLHKI-----KVDEQYYIGFF 537 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |