CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOBB (Biosynthetic arginine decarboxylase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=speA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGA----SDPV------------RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGT-SLPLHEMVGGGCGERGPYYLGMF 377 QL Q + F G L + + A + +C + ++I + P+ +TY N S+F SIPD WAI QLFPIVPI LDE+P V ++D+TCDSDG+I F+G G T +LPLH++ YY+G F Sbjct: 401 QLIQESVSLFNLGYLNMAERANAEWICSKIIRKINSIVEKMKPIPDELQNFQLSLRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLDEKPDVLTSIADITCDSDGEITSFVGENGRTKALPLHKI-----KVDEQYYIGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROM0 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9301) GN=speA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17 Identity = 54/127 (42.52%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS---DPVR-------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHE 326 A + K+ C+ F+ G L + + A + L AKEI + D + TY+ NLSIF SIPD WAI Q+FPIVPIH E P +G +DLTCDSDGK++ FI G + L LHE Sbjct: 412 AKKFKEDCLVAFRLGFLSLAERAYAEELAWACAKEISNNLNNDEINHPDLSEITETLASTYYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDDGKIKSLLNLHE 538
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_BACV8 (Biosynthetic arginine decarboxylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=speA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG--------ASDPVRT--------YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 A Q+++ ++ F G + ++ A ++ L V +EI A D R Y N S+F S+PD WAI Q+FPI+PI LDE+P L D+TCDSDGKI FI LP+H + G + YY+G+F Sbjct: 396 AQQIREEALDLFSHGIVDLKTRAQIERLYWSVTREINQIASGLKHAPDEFRKLDKLLADKYFCNFSLFQSLPDSWAIDQIFPIMPIQRLDEKPDRNATLQDITCDSDGKIANFISTRYVSHDLPVHSLKG-----KDAYYIGVF 534
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROM2 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9215) GN=speA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.440e-17 Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS---DPVR-------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHE 326 A + K+ C+ F+ G L + + A + L AKEI + D + TY+ NLSIF SIPD WAI Q+FPI+PIH E P +G +DLTCDSDGK++ FI G + L LHE Sbjct: 412 AKKFKEDCLVAFRLGFLSLAERAYAEELTWACAKEIANNLNNDEINHPDLFEITETLASTYYANLSIFKSIPDCWAINQIFPIMPIHRHLEEPFCKGNFADLTCDSDGKLNSFINNGKIKSLLNLHE 538
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROMS (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain AS9601) GN=speA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.187e-17 Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS---DPVR-------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 A + K+ C+ F+ G L + + A + L AKEI + D + TY+ NLSIF SIPD WAI Q+FPIVPIH E P +G +DLTCDSDGK++ FI G + L LH+ E Y +G+F Sbjct: 412 AKKFKEDCLVAFRLGFLSLAERAYAEELTWACAKEISNNLNNDEINHPDLSEITETLASTYYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDNGKIKSLLNLHKP-----EEDKDYLIGIF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROM9 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9312) GN=speA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.187e-17 Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS---DPVR-------------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 A + K+ C+ F+ G L + + A + L AKEI + D + TY+ NLSIF SIPD WAI Q+FPIVPIH E P +G +DLTCDSDGK++ FI G + L LH+ E Y +G+F Sbjct: 412 AKKFKEDCLVAFRLGFLSLAERAYAEELTWACAKEISKNLNNDAINHPDLSEITETLASTYYANLSIFKSIPDSWAINQIFPIVPIHRHLEEPFCKGNFADLTCDSDGKLNNFIDDGKIKSLLNLHKP-----EEDKDYLIGIF 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPE1_AVESA (Arginine decarboxylase OS=Avena sativa GN=SPE1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEM 329 + YH+NLS+F+ +PDYW I LFP++P+ LDE+P + L D+TCDSDGK+DKFI ++PLH + Sbjct: 429 IYNYHMNLSVFSLMPDYWGIQHLFPMMPVSRLDEKPTHKATLVDVTCDSDGKVDKFIRDTETMPLHPL 496
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_RHOBA (Biosynthetic arginine decarboxylase OS=Rhodopirellula baltica GN=speA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17 Identity = 53/137 (38.69%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 24 CIEQFKDGTLGIEQLATVDGLCDFVA---KEIGASDPVRT-------------YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMF 377 C+ F G L +EQ + L + +E+ S R Y N S+F S+PD WAI QLFPI+PIH L E+P VL D+TCDSDGK+D F+ GG +L LH + G PY L +F Sbjct: 437 CMNLFSGGYLPLEQRVAAENLYFAICHRVRELAESMKERPDDLKHLDRMLSDIYFANFSLFQSMPDSWAIDQLFPIMPIHRLLEKPSRHAVLGDITCDSDGKVDAFVCGGGRQRTLMLHPLKSG-----EPYQLAVF 568
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PROMP (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=speA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17 Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG----------------ASDPVRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG 305 A + K+ C+ F+ G + +E+ A + L AKEI TY+ NLS+F SIPD WAI Q+FPI+PIH E P +G +DLTCDSDGK++ FI G Sbjct: 412 AKKFKEDCLVAFRLGFICLEERAYAEELTWACAKEIANQLENNEIIHPDLSEITDTLASTYYANLSVFKSIPDTWAINQVFPIIPIHRHLEEPFCKGHFADLTCDSDGKLNNFIDNG 528
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_BACFR (Biosynthetic arginine decarboxylase OS=Bacteroides fragilis GN=speA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 3 ADQLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIG--------ASDPVR--------TYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGGTSLPLHEMVGGGCGERGPYYLGMF 377 A Q+++ ++ F G + ++ A ++ L + +EI A D R Y N S+F S+PD WAI Q+FPI+PI LDE+P L D+TCDSDGKI FI T H M ++ PYY+ +F Sbjct: 396 AQQIREEALDLFSHGIVDLKTRAQIERLYWSITREINQIAGGLKHAPDEFRGLSKLLADKYFCNFSLFQSLPDSWAIDQIFPIMPIQRLDEKPDRSATLQDITCDSDGKIANFI--STRNVAHYMPVHSLKQKEPYYVAVF 534 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |