CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_PSEAE (Biosynthetic arginine decarboxylase OS=Pseudomonas aeruginosa GN=speA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.011e-16 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 Y N S+F S+PD WAIGQ+ PI+P+H L E P R VL DLTCDSDGKI +++ TSLP+HE+ G Y +G+F Sbjct: 465 YICNFSVFQSLPDTWAIGQVLPILPLHRLGEEPDRRAVLQDLTCDSDGKITQYVDEQSIETSLPVHEVKEG-----EDYLIGVF 543
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XYLFM (Biosynthetic arginine decarboxylase OS=Xylella fastidiosa (strain M12) GN=speA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RGV+ DLTCDSDG + +++ ++LPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAINQIFPIVPIERLNEAPTRRGVVCDLTCDSDGTVKQYVENESLDSALPLHVLRHGEAYRIGFFLVGAY 536
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XYLFA (Biosynthetic arginine decarboxylase OS=Xylella fastidiosa GN=speA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RGV+ DLTCDSDG + +++ ++LPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAINQIFPIVPIERLNEAPTRRGVVCDLTCDSDGTVKQYVENESLDSALPLHVLRHGEAYRIGFFLVGAY 536
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOUR (Biosynthetic arginine decarboxylase OS=Geobacter uraniireducens (strain Rf4) GN=speA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 129 RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGTS-LPLHEMVGGGCGERGPYYLGMF 377 +TY N S+F S+PD WAI QLFPIVPI L+++P V ++D+TCDSDG+I F+G G T LPLH++ + YY+G F Sbjct: 457 QTYFANFSLFQSVPDSWAIDQLFPIVPIQRLNQKPDVIASIADITCDSDGEITSFVGENGRTKFLPLHKI-----RKDEAYYIGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOLS (Biosynthetic arginine decarboxylase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=speA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 9 QLKQRCIEQFKDGTLGIEQLATVDGLCDFVAKEIGAS----DPV------------RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG-GGTS--LPLHEMVGGGCGERGPYYLGMF 377 QL + F G L ++ A + L + K+I + P+ +TY N S+F SIPD WAI QLFPI+P+ L +RP V ++D+TCDSDG+I F+G G S LP+H++ + YY+G F Sbjct: 401 QLINEAVSLFNLGYLTLQDRAIAEWLYSKIIKKINSIVEKIKPIPEELQNFQLALRQTYFANFSLFQSIPDSWAIDQLFPIMPLQRLGQRPDVMASIADITCDSDGEITSFVGENGRSKFLPMHKL-----KKDEDYYIGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XYLFT (Biosynthetic arginine decarboxylase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=speA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RGV+ DLTCDSDG + +++ ++LPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAINQIFPIVPIERLNEVPTRRGVVCDLTCDSDGTVKQYVENESLDSALPLHVLRHGEAYRIGFFLVGAY 536
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XYLF2 (Biosynthetic arginine decarboxylase OS=Xylella fastidiosa (strain M23) GN=speA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RGV+ DLTCDSDG + +++ ++LPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAINQIFPIVPIERLNEVPTRRGVVCDLTCDSDGTVKQYVENESLDSALPLHVLRHGEAYRIGFFLVGAY 536
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_XANCP (Biosynthetic arginine decarboxylase OS=Xanthomonas campestris pv. campestris GN=speA PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 126 VRTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 V Y VN S+F SIPD WAI Q+FPIVPI L+E P RG+++D+TCDSDG + ++ +SLPLH + G G + +G + Sbjct: 450 VDKYFVNFSVFESIPDVWAIDQVFPIVPIERLNEAPQRRGIIADMTCDSDGMVKTYVENESLDSSLPLHGLNPGESYRIGFFLVGAY 536
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_GEOMG (Biosynthetic arginine decarboxylase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=speA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 129 RTYHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIG--GGTS-LPLHEMVGGGCGERGPYYLGMF 377 +TY N S+F SIPD WAI QLFPIVPI L+++P V ++D+TCDSDG+I F+G G T LPLH++ + Y++G F Sbjct: 457 QTYFANFSLFQSIPDSWAIDQLFPIVPIQRLNQKPDVMASIADITCDSDGEITSFVGENGRTKYLPLHKI-----RKDEDYFVGFF 537
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_TOLAT (Biosynthetic arginine decarboxylase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=speA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.597e-14 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 141 VNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 VN S+F S+PD W I Q+FPI+P+ LD++P RGV+ D+TCDSDG I +++ G SLP+ EM G + +G + Sbjct: 464 VNFSLFQSLPDAWGIDQIFPIMPLSGLDQQPTRRGVIMDITCDSDGMIKEYVDGVGIENSLPMPEMRNDETNYMGFFLVGAY 545 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |