CX300194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_ECO5E (Biosynthetic arginine decarboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_ECO57 (Biosynthetic arginine decarboxylase OS=Escherichia coli O157:H7 GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_ALHEH (Biosynthetic arginine decarboxylase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 144 NLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMF 377 N S+F S+PD WAI Q+FP++P+ LDE P R VL DLTCDSDG I ++ G ++LPL G PY LG+F Sbjct: 459 NFSLFQSMPDVWAIDQIFPVLPLQRLDEPPASRAVLQDLTCDSDGCIRGYVDRDGVESTLPLPPWRPG-----EPYLLGIF 534
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHEPW (Biosynthetic arginine decarboxylase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=speA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13 Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ + PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWT-----QESPYLIGFF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHESH (Biosynthetic arginine decarboxylase OS=Shewanella sediminis (strain HAW-EB3) GN=speA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.124e-13 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FPI+P+ LD+ P R V+ D+TCDSDG ID+++ G T++P+ PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPIMPLSGLDKAPERRAVMLDITCDSDGTIDQYVDGQGIETTIPVPTW-----SAESPYLIGFF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_YERPE (Biosynthetic arginine decarboxylase OS=Yersinia pestis GN=speA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPL 320 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ Sbjct: 487 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPM 550
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHESW (Biosynthetic arginine decarboxylase OS=Shewanella sp. (strain W3-18-1) GN=speA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLIGFF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHESR (Biosynthetic arginine decarboxylase OS=Shewanella sp. (strain MR-7) GN=speA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLMGFF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHESM (Biosynthetic arginine decarboxylase OS=Shewanella sp. (strain MR-4) GN=speA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLMGFF 542
BLAST of CX300194 vs. ExPASy Swiss-Prot
Match: SPEA_SHESA (Biosynthetic arginine decarboxylase OS=Shewanella sp. (strain ANA-3) GN=speA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMF 377 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWSAESPYLMGFF 542 The following BLAST results are available for this feature:
BLAST of CX300194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300194 ID=CX300194; Name=CX300194; organism=Citrus clementina; type=EST; length=377bpback to top |