CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_ESCF3 (Fatty acid oxidation complex subunit alpha OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadJ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.494e-13 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQ 259 ALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ A+ GLV+ VP A+E A++ Q Sbjct: 120 ALACHGRICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVDEIVPQSILLQAAVERAKQERQ 207
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.951e-13 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKG 265 ALAC R+C + LGLPE L ++PG+GGTQRLPRL+G + A D+I TG+++ K A +LGLV VP L+IA++ KG Sbjct: 127 ALACHSRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKNLGLVEEAVPLS----ILLDIAEKQALKG 212
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadJ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.951e-13 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQK 262 ALAC RIC + LLGLPE L ++PG+GGTQRLPRLVG S A ++I G+++ + A+ GLV+ VP Q LE A E+ +K Sbjct: 120 ALACHSRICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVDDVVP----QSILLEAAAELAKK 204
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.548e-13 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 2 ALACDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIA 244 ALAC R+C ++G+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLV+ VP A+E+A Sbjct: 120 ALACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQALKMGLVDDAVPESILLRTAVEMA 202
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: CRTL_DICDI (3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.328e-13 Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKY 427 ALA D+R+ A +GL T L I PG G T + +VG+ VA ++ + + G +A LGLV V + Q AL +A+ I++ IA+ + + D+ +L E + ++D +EG+ A E R PK+ Sbjct: 149 ALATDIRVVSNKAPVGLTFTKLGIHPGMGVTHSITNIVGQDVASYMLLSSDIIKGDEAQRLGLVLKSVESDQVLPTALNLAETISKNSTIAVNSTTKTLRNKYNSDLDKSLTREADAQSQCWASKDIVEGILAIRESRDPKH 290
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SHIDS (Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.347e-13 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIA-QEINQKGPIAIR 280 ALAC R+C + +L LPE L ++PG+ GTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+E+A Q+ P+ +R Sbjct: 120 ALACHGRVCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVR 215
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHP_DANRE (Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.347e-13 Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV------NYCVPAGQAQLKAL 235 AL C RI A LGLPE L I+P AGGTQRLPRL+G A ++I TGR VS ++A+ LG+V N C A + LKA+ Sbjct: 105 ALVCHYRIAHYKARLGLPEVTLGILPAAGGTQRLPRLIGIPAALELITTGRHVSAQEALKLGMVDQVTEQNTCEVALEFALKAV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: MFPA_BRANA (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica napus PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 5.677e-13 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQ----AQLKALEIAQ 247 ++AC RI A LGLPE L +IPG GGTQRLPRLVG + A ++I T + V ++ SLGL++ VP + A+ AL+IA+ Sbjct: 121 SMACHARISAPGAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAE 206
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECH1_PONAB (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii GN=ECH1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.677e-13 Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQL-KALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPK 424 ACD+R C + A + E + + G QRLP+++G +S+ ++ FT RK+ +A+ GLV+ P + L AL +A EI+ K P+A++ K + + +A +L + L T+D ++ + A E ++ K Sbjct: 181 ACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLMKSVQAATENKELK 321
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECH1_HUMAN (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 7.415e-13 Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQL-KALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPK 424 ACD+R C + A + E + + G QRLP+++G +S+ ++ FT RK+ +A+ GLV+ P + L AL +A EI+ K P+A++ K + + +A +L + L T+D ++ + A E ++ K Sbjct: 181 ACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTENKELK 321 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |