CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_VIBFM (Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri (strain MJ11) GN=fadB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.071e-11 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 196 LA D R+ E A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA++LG+++ Sbjct: 122 LATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALALGMID 185
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_ERWCT (Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora subsp. atroseptica GN=fadB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.071e-11 Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLE 313 LA D R+ A +GLPET L I+PG GGT RLPRL+G A +II G+ VS DA+ +GLV V A K + P AI+M K+AI L+ Sbjct: 122 LATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAADALKVGLVQAVV----ANEKLI----------PAAIKMLKQAINGELD 210
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHP_MOUSE (Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.071e-11 Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVD--MASALELEEECYIGTLHTEDRLEGLAA 400 AL C RI A +G PE L I+PGA GTQ LPR+VG VA D+I +GR +S +A+ LG+++ V + + +A++ AQ + K R+ + + +D A A+ + Y G L E + + A Sbjct: 104 ALGCHYRIANAKARVGFPEVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVE-EAIKFAQTVIGKPIEPRRILNKPVPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQA 237
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPY (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPS (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPP (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis (strain Pestoides F) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPN (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPG (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPE (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_YERPB (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCV 205 LA D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA+ +GLV+ V Sbjct: 122 LATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDALKIGLVDAVV 188 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |