CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLE 313 LA D RI A +GLPET L IIPG GGT RLPR++G A + I TG + +DA+ +G V+ V +ALE+A AI+M K A+ + L+ Sbjct: 122 LATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGNEQRAEDALKVGAVDAVVAP-----EALEVA---------AIQMLKDAVAEKLD 210
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_ALISL (Fatty acid oxidation complex subunit alpha OS=Aliivibrio salmonicida (strain LFI1238) GN=fadB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 196 LA D R+ + A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA+ +G+V+ Sbjct: 122 LATDFRLADDTASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALKIGMVD 185
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHP_HUMAN (Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAI 298 AL C RI A +GLPE L ++PGA GTQ LPRL G A D+I +GR++ +A+ LG+++ V + + +A+ AQ ++ + + R+ + I Sbjct: 106 ALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVE-EAIRFAQRVSDQPLESRRLCNKPI 203
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECH1_MOUSE (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 39/141 (27.66%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLK-ALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPK 424 ACD+R C + A + E + + G QRLP+++G +S+ ++ F+ RK+ +A+ GLV+ A L A +A +I+ K P+A++ +K + + + +L+ + L T+D ++ + A EKR K Sbjct: 180 ACDIRYCTQDAFFQIKEVDMGLAADVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVFQDKDAMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKRDTK 320
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHP_CAVPO (Peroxisomal bifunctional enzyme OS=Cavia porcellus GN=EHHADH PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 42/135 (31.11%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 2 ALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITK--GLEVDMASALELEEECYIGTLHTEDRLEGLAA 400 +L C RI A +G PE L I+PGA GTQ LPRL+G A D+I +GR ++ +A+ LG+++ V + + +A++ AQ+I + R+ R ++ ++ A+E + G L E + + A Sbjct: 108 SLGCHYRIAHAEARIGFPEVTLGILPGARGTQLLPRLIGVPAALDLITSGRHITAGEALKLGILDKVVNSAPVE-EAIKFAQKILNQPLEPRRILNRPVSSLPNMDAIFGEAVEKMRRQHPGQLAPETCVRSVQA 241
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: ECHD3_XENLA (Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Xenopus laevis GN=echdc3 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.940e-11 Identity = 39/141 (27.66%), Postives = 67/141 (47.52%), Query Frame = 2 Query: 8 ACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAITKGLEVDMASALELEEECYIGTLHTEDRLEGLAAFAEKRKPKYT 430 +CD+ + + + P + + G L R V + VA +++FTG +S DA+ GLV+ VP + + IA +I Q + + K + + + A +L E + L +D EGL +F +KRKP +T Sbjct: 153 SCDIAVASDKSRFATPGVNVGLFCSTPGVA-LGRAVPRKVALEMLFTGEPISAHDALLHGLVSKVVPEENLKSETNRIALKICQTSHSVVALGKSTFYRQMAKSLTDAYKLTSEVMVENLAMKDGQEGLKSFIQKRKPVWT 292
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_PSEAE (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa GN=fadB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQ 247 LA D R+ A +GLPE L I PG GGT RLPRL+G A + I +G++ +DA+ +G V+ V Q Q AL++A+ Sbjct: 123 LAADFRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIGCDNAVEWIASGKENKAEDALKVGAVDAVVAPEQLQAAALDLAK 203
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_PSEAB (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQ 247 LA D R+ A +GLPE L I PG GGT RLPRL+G A + I +G++ +DA+ +G V+ V Q Q AL++A+ Sbjct: 123 LAADFRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIGCDNAVEWIASGKENKAEDALKVGAVDAVVAPEQLQAAALDLAK 203
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_PSEA8 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain LESB58) GN=fadB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQ 247 LA D R+ A +GLPE L I PG GGT RLPRL+G A + I +G++ +DA+ +G V+ V Q Q AL++A+ Sbjct: 123 LAADFRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIGCDNAVEWIASGKENKAEDALKVGAVDAVVAPEQLQAAALDLAK 203
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADB_PSEA7 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain PA7) GN=fadB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.064e-11 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 2 Query: 5 LACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQ 247 LA D R+ A +GLPE L I PG GGT RLPRL+G A + I +G++ +DA+ +G V+ V Q Q AL++A+ Sbjct: 123 LAADFRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIGCDNAVEWIASGKENKAEDALKVGAVDAVVAPEQLQAAALDLAK 203 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |