CX300207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.556e-15 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 ALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQ 259 ALAC R+C + A +LGLPE L ++PG+GGTQRLPRLVG S A ++I TG+++ + A+ +GLV+ VP A+E+AQ+ Q Sbjct: 120 ALACHSRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVDEVVPHSILLTAAVELAQKERQ 207
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_VIBCH (Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae GN=fadJ PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 2 Query: 2 ALACDLRIC--GEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 208 ALACD R+C E LGLPE L ++PG+GGTQRLPRL+G A D+I TG+++ K A LG+V+ CVP Sbjct: 121 ALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVP 191
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_VIBC3 (Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 2 Query: 2 ALACDLRIC--GEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 208 ALACD R+C E LGLPE L ++PG+GGTQRLPRL+G A D+I TG+++ K A LG+V+ CVP Sbjct: 121 ALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVP 191
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAI 298 ALAC R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+K+ K A+ +GLVN VP Q L+ A E+ G A + K+++ Sbjct: 118 ALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKMGLVNDVVP----QTILLQTAVEMALAGKRAPKPVKKSL 214
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSM (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 2 ALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIA-QEINQKGPIAIR 280 ALAC R+C + A +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+E+A Q+ P+ +R Sbjct: 120 ALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQDRPSSRPLPVR 215
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_ECO7I (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 2 ALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIA-QEINQKGPIAIR 280 ALAC R+C + A +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+E+A Q+ P+ +R Sbjct: 120 ALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQDRPSSRPLPVR 215
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.066e-15 Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2 ALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIR 280 ALAC RIC + A +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ K A+ +GLV+ VP LE A E+ KG A R Sbjct: 120 ALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVDEVVP----HAILLEAAVELAIKGRSAQR 210
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_VIBHB (Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 ALACDLRICGEA--ALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKG 265 ALACD R+C ++ LGLPE L ++PG+GGTQRLPRL+G + D+I TG+++ K A LG+V+ CVP + L+IA+ +KG Sbjct: 120 ALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVP----ETVLLDIAKMHVEKG 205
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIRMAKRAI 298 ALAC R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP Q L+ A E+ G A + K+++ Sbjct: 118 ALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQALKMGLVNDVVP----QTILLQTAVEMALTGKRAPKPVKKSL 214
BLAST of CX300207 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.922e-15 Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2 ALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEIAQEINQKGPIAIR 280 ALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K +A R Sbjct: 120 ALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQR 210 The following BLAST results are available for this feature:
BLAST of CX300207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300207 ID=CX300207; Name=CX300207; organism=Citrus clementina; type=EST; length=448bpback to top |