CX300210

Overview
NameCX300210
Unique NameCX300210
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length432
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3620 contig Ccv1_Contig3620:3..434. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300210 vs. ExPASy Swiss-Prot
Match: RLA2_ARTSA (60S acidic ribosomal protein P2 OS=Artemia salina PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 2 
Query:   44 MKVIAAYLLAVLGGNAKPSADDLKNILGSVGAEADDERIEFLLSEVKGKDITELIASGREKL 229
            M+ +AAYLLA L GNA PS  D++ IL SVG E +  +++ +++E+KGKD+  LIA G+ KL
Sbjct:    1 MRYVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQTKL 62
The following BLAST results are available for this feature:
BLAST of CX300210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RLA2_ARTSA6.158e-1150.0060S acidic ribosomal protein P2 OS=Artemia salina ... [more]

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Properties
Property NameValue
Genbank descriptionC07007E03SK SaltLeaf1 Citrus clementina cDNA clone C07007E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300210 ID=CX300210; Name=CX300210; organism=Citrus clementina; type=EST; length=432bp
AAAAGTCGATCTTTATCGTCTCACCTCTCTGCTATAAGCAAAAATGAAGG
TGATCGCTGCTTACTTGCTCGCCGTTTTGGGTGGCAACGCCAAACCATCG
GCCGATGACTTGAAGAACATTCTTGGATCAGTTGGAGCTGAAGCTGATGA
TGAGAGAATAGAGTTTCTCTTGTCAGAAGTCAAGGGCAAGGATATTACCG
AGCTAATTGCATCCGGAAGGGAGAAGTTGGCATCAGTGCCATCAGGTGGT
GGTGTTGCTGTTGCTGCATCAGCACCTGCTGCAGGTGGTGCTGCTGCTCC
TGCCGCTGAGGCTAAAAAAGAGGAGAAGGTCGAGGAGAAGGAAGAATCTG
ATGATGACATGGGTTTCAGCCTTTTCGACTAAGCTCTCAATGTTGCTTTT
TCTGTATGAAGGATTATTATATTTGGTCATTA
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