CX300215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_SYNEN (Photosystem I reaction center subunit II OS=Synechococcus elongatus naegeli GN=psaD PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 6.508e-39 Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 44 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GRE V RSIG+N +P ++KFT Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFT 132
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_NOSS8 (Photosystem I reaction center subunit II OS=Nostoc sp. (strain PCC 8009) GN=psaD PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.230e-38 Identity = 79/125 (63.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 41 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 +P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKEQ +ALG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GRE V R IG+N SP ++KF+ Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIALGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPAQLKFS 131
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_ANAVT (Photosystem I reaction center subunit II OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaD PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 4.218e-38 Identity = 78/125 (62.40%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 41 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGRE V N RSIG+N +P +VKF+ Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPSQVKFS 132
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_ANASP (Photosystem I reaction center subunit II OS=Anabaena sp. (strain PCC 7120) GN=psaD PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.571e-37 Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 2 Query: 41 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 +P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GRE V N RSIG+N +P +VKF+ Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPSQVKFS 132
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_GLOVI (Photosystem I reaction center subunit II OS=Gloeobacter violaceus GN=psaD PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.315e-36 Identity = 79/132 (59.85%), Postives = 95/132 (71.97%), Query Frame = 2 Query: 20 ELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 EL +P+FGGSTGGLLRKAQ+EE Y+I W S +EQ+FEMPTGGAA M G N+L LARKEQC AL +L S +KI+ + YRV+PNGE + P DGV EK NPGRE VG R IG N +P++VKFT Sbjct: 6 ELPFGGSTPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGAATMVAGTNVLYLARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRKIGDNPNPVDVKFT 137
BLAST of CX300215 vs. ExPASy Swiss-Prot
Match: PSAD_FREDI (Photosystem I reaction center subunit II OS=Fremyella diplosiphon GN=psaD PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.795e-36 Identity = 75/125 (60.00%), Postives = 94/125 (75.20%), Query Frame = 2 Query: 41 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFT 412 +P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M++G NLL LARKE +ALG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GRE V R IG+N +P +KF+ Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIALGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPSAIKFS 131 The following BLAST results are available for this feature:
BLAST of CX300215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300215 ID=CX300215; Name=CX300215; organism=Citrus clementina; type=EST; length=413bpback to top |