CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G E N+ W A I GP +T +E G F + F + YP PPTV+F S+M+HPNVY DG +C+ IL Sbjct: 16 LQEDPPAGVS-GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL K+P SAG V E ++F W A+I+GPP++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL Sbjct: 12 DLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL ++P SAG V E ++F W A+I+GP D+ Y+GG F + FP YP PP V FT+ ++HPNV +G +C+ IL Sbjct: 12 DLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL ++P SAG V E ++F W A+I+GP D+ Y+GG F + FP YP PP V FT+ ++HPNV +G +C+ IL Sbjct: 12 DLAQDPPAQCSAGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L ++P G S G ++N+ W+A I GP DT +E G F + F + YP PPTVRF S+++HPNVY DG +C+ IL Sbjct: 16 LQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL K+P SAG V + ++F W A+I+GP D+ Y GG F + FP +YP PP V FT+ ++HPN+ +G +C+ IL Sbjct: 12 DLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL ++P SAG V + +++ W ASI+GPPD+ Y GG F + FP +YP+ PP + T++++HPN+ +G +C+ IL Sbjct: 12 DLGRDPPSSCSAGPVGD-DLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL ++P SAG V + ++F W A+I+GPP++ Y+GG F + FP +YP PP V FT+ ++HPN+ +G +C+ IL Sbjct: 12 DLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.238e-14 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 58 NPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 282 +P G SA V + NV W+A IIGP DT +E G F +M F + YP PP V+F S+M+HPNVY G++C+ IL Sbjct: 19 DPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL 92
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.238e-14 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 58 NPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 282 +P G SA V + NV W+A IIGP DT +E G F +M F + YP PP V+F S+M+HPNVY G++C+ IL Sbjct: 19 DPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL 92 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |