CX308580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = -2 Query: 55 NVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILH 240 ++ W I G P T +EGG + M FP+ YP PP RFT ++HPNVYP G VC+SIL+ Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN 98
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL K+P SAG V E ++F W A+I+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.099e-13 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = -2 Query: 58 LCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 291 L + + SA VD++++ W I GP DT Y G F + FP NYP PP ++F S MWHPNV G +C+ IL Sbjct: 20 LLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDIL 97
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.099e-13 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL K+P SAG V E ++F W A+I+GP ++ Y GG F + FP +YP PP V F ++++HPN+ +G +C+ IL Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13 Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = -2 Query: 58 LVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISIL 255 + D++N+F+W+A I GP +T YEGG F + P+ YP+ PP VRF ++++HPNV + G++C+ IL Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL 94
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = -2 Query: 58 DLCKNPVDGFSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 294 DL ++P SAG V + ++F W A+I+GP D+ Y+GG F + FP +YP PP V FT+ ++HPN+ + +C+ IL Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDIL 89
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = -2 Query: 58 DESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 249 D N+F+W A++ GP DT+YE + + FP +YP PP V+FT+ WHPNV G +C+ IL Sbjct: 55 DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL 118
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = -2 Query: 58 DESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV-YPDGKVCISIL 249 DES+++ W A I GPPDT YE G F ++ P NYP+ PPT++F ++++HPN+ + G++C+ +L Sbjct: 26 DESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLL 90
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = -2 Query: 1 FSAGLVDESNVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTP 267 FS G + +N++EW+A I GP T YEGG FN + FP +YP PP F + ++HPN+ +G +C++IL ++WTP Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTP 101
BLAST of CX308580 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = -2 Query: 58 NVFEWSASIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDGKVCISIL 240 N+F W +I G DT++EGG + M F D++P +PP +F ++HPNVYP G VC+S+L Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97 The following BLAST results are available for this feature:
BLAST of CX308580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308580 ID=CX308580; Name=CX308580; organism=Citrus clementina; type=EST; length=364bpback to top |