CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METAC (30S ribosomal protein S8P OS=Methanosarcina acetivorans GN=rps8p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.804e-19 Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 48 GDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTASFERWEKQFLPAKNFGALIVTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.900e-19 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD RAG V+L G++NK G I PRF V +E E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 48 GEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.900e-19 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEYV D R GK VV+L GR+N G I PRF V V E++ W + LP+RQ G ++LTTS G++ H EAR VGG ++ + Y Sbjct: 48 GEFEYVYDGRGGKYVVQLLGRINDIGAIKPRFHVKVDELQKWEEKYLPARQVGILILTTSKGVVSHLEARENRVGGILVAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRCJ (30S ribosomal protein S8P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GE EY+DD R GK VV+L G++N G I PRF V +EI W + LP+RQ G +V++TS G+M H EA+ K +GG +L + Y Sbjct: 48 GEIEYIDDGRGGKYVVQLLGKINDIGAIRPRFPVKYREIVEWEQKYLPARQIGILVISTSQGVMSHLEAKEKKIGGVLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI+V+L GR+NKCG I+PR+ + +E + + R LPS++ G I+++T G+M H+EA R+ GG VLG+ Y Sbjct: 48 GEFEYIDDGRWGKILVQLMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_THEPD (30S ribosomal protein S8P OS=Thermofilum pendens (strain Hrk 5) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G+FE +DD R GKIVV L GR+NK GVI PR+ V E E W LPSR G ++++T G+M H EA+ K +GG +L + Y Sbjct: 47 GDFELIDDGRGGKIVVNLLGRINKIGVIKPRYPVKKNEFEAWEREYLPSRDVGLLIVSTPKGVMTHREAKEKGLGGVLLAYVY 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE+++D RAG VEL G++NKCG I PR+ V E E + R LP+R FG ++++TS GIM H EA+ K +GG+++ + Y Sbjct: 48 GEFEFIEDGRAGIFKVELIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRLISYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 50 FEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 50 FEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDV---GVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD RAGKI+V+L GR+NKCG ISPR+ + G+ + + + LPS++ G I+++T G+M H + R+ +GG LG+ Y Sbjct: 48 GEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |