CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYVRRYLPSKEIGIIIVSTSKGVMSHKEAARLRIGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_KORCO (30S ribosomal protein S8P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps8p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = -3 Query: 44 EFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 289 EFEYVDD R GK VV LNGR+NK GVI PRF V V E W LP+ G I+++T+ G+M H EA+ + +GG ++ + Y Sbjct: 49 EFEYVDDGRFGKYVVRLNGRINKAGVIKPRFPVKVGEFSRWEKIYLPAENVGLIIVSTNQGVMTHREAKERGIGGVLIAYCY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.762e-18 Identity = 39/86 (45.35%), Postives = 63/86 (73.26%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD R+GKIVV+L GR+NKCG I+PR+ + K+ + + R LPS++ G ++++T+ G+M H++A R+ +GG LG+ Y Sbjct: 48 GEFEFIDDGRSGKIVVQLLGRINKCGPIAPRYPLKYKDLLTLPDYVRRYLPSKEIGVLIISTNKGVMTHKDAIRERIGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.762e-18 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE+++D RAG VEL G++NKCG I PRF V E + R LP+R FG ++++T+ G+M HEEA+++ +GG++L + Y Sbjct: 48 GEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIY (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIN (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIM (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIL (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 48 GEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |