CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_THENV (30S ribosomal protein S8P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.417e-18 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++T+ G+M H EA+ K +GG +L + Y Sbjct: 48 GEVEYIDDGRGGKYVVQLLGKINDIGPIKPRYPVKYREIVQWEQKFLPARQIGILVISTNQGVMSHVEAKEKKIGGVLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_HYPBU (30S ribosomal protein S8P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.417e-18 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V L GR+NK GVI PRF V K++ W + LPSR G ++++TS G+M H EA ++ +GG +L + Y Sbjct: 48 GEFEYIDDGRWGKIRVRLLGRINKAGVIKPRFSVKYKDLIRMPDWLRKYLPSRDIGILIISTSQGVMSHREAIQRRIGGVLLAYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.417e-18 Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FEYV++HR GK +VEL+G +N CG I PRF V E E + R LP+R FG ++++T+ G+M ++AR++ +GG +L + Y Sbjct: 49 FEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.381e-18 Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE +DD RAG V+L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 48 GEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.381e-18 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G+M H EA+ + +GG +L + Y Sbjct: 48 GEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.095e-17 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GE EYVDD R GK +V+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G++ H EA+ K +GG +L + Y Sbjct: 48 GEIEYVDDGRGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVVSHIEAKEKKIGGVLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.185e-17 Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GE EY+DD + GK +V+L G++N G I PR+ V +EI W + LP+RQ G ++++TS G+M H EA+ + +GG +L + Y Sbjct: 48 GEIEYIDDGKGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILIISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_NITMS (30S ribosomal protein S8P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps8p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.159e-17 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE++DD R GK ++L ++ KCG ISPRF V E W + LP+ G +++TT+ G+M H EA +K +GG ++G+ Y Sbjct: 48 GEFEHIDDKRGGKFKIKLLAKITKCGAISPRFKVKTDEFNNWEQQYLPAYDRGMLLVTTNQGVMSHHEATQKGIGGFLIGYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METHJ (30S ribosomal protein S8P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.095e-17 Identity = 36/82 (43.90%), Postives = 56/82 (68.29%), Query Frame = -3 Query: 44 EFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 289 E+ ++D R G+ V ++G +NKCG ISPR+ V + E+E W LPS+ G ++++TS G+M H +ARR VGG++LG+ Y Sbjct: 49 EYTRIEDGRGGQFKVVMSGLINKCGCISPRYSVSLDEMEYWEQLYLPSKNIGMLMISTSKGVMGHHDARRNGVGGELLGYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_PICTO (30S ribosomal protein S8P OS=Picrophilus torridus GN=rps8p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.266e-17 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE +++ R GK VEL+ +N CGVI PR V IE + +R LP++ FG I+LTT+ GIM H EAR+ +GGK+L + Y Sbjct: 49 FEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |