CX308600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METVS (30S ribosomal protein S8P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps8p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.581e-16 Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D +AG V+L G++NKCG + PR+ V +E E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 48 GNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METVA (30S ribosomal protein S8P OS=Methanococcus vannielii GN=rps8p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.581e-16 Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D +AG V+L G++NKCG + PR+ V +E E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 48 GNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_STAMF (30S ribosomal protein S8P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps8p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIE---GWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFEY+DD R GKI V+L GR+NK GVI PRF V ++++E W + LP+ G ++L+T G++ H+EA K GG +L + Y Sbjct: 48 GEFEYIDDGRWGKIKVQLLGRINKTGVIKPRFPVKLRDLERMPHWLRKYLPAYNIGILILSTPHGVLSHKEAIAKKTGGVLLAYVY 133
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.696e-16 Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 44 FEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 286 FE +D+ R GK + LN +N CGVI PRF V + +E + AR LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 49 FEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METST (30S ribosomal protein S8P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.696e-16 Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FE VDD +AG VEL G +NKCGVI PR V E E + R LP++ FG +++TT G+M H EA+ +GG++L + Y Sbjct: 48 GNFELVDDGKAGIFNVELVGNINKCGVIKPRHAVKNTEFEDYEKRYLPAKNFGILIVTTPQGVMTHHEAKEAGIGGRLLVYVY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METM7 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.696e-16 Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D +AG V+L G++NKCG + PRF V + E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 48 GNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METTL (30S ribosomal protein S8P OS=Methanococcus thermolithotrophicus GN=rps8p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.521e-16 Identity = 34/83 (40.96%), Postives = 58/83 (69.88%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D RAG VEL G++NKCG + PR+ V +E E + R LP++ FG ++++T G+M H+EA+ + +GG+++ + + Sbjct: 48 GNFEYIEDGRAGIYKVELIGQINKCGAVKPRYAVKKQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKNQGLGGRLISYVF 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_METM6 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.521e-16 Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D +AG V+L G++NKCG + PRF V + E + R LP++ FG ++++T G+M H+EAR VGG+++ + Y Sbjct: 48 GNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARSAGVGGRLISYIY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_META3 (30S ribosomal protein S8P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps8p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.599e-16 Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 G FEY++D +AG VEL G +NKCG + PR+ V E E + R LP++ FG ++++T G+M H+EA+ +GG+++ + Y Sbjct: 48 GNFEYIEDGKAGIYKVELTGHINKCGAVRPRYAVKKTEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKSNGLGGRLISYIY 130
BLAST of CX308600 vs. ExPASy Swiss-Prot
Match: RS8_CENSY (30S ribosomal protein S8P OS=Cenarchaeum symbiosum GN=rps8p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.599e-16 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = -3 Query: 44 GEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 292 GEFE+V+D R GK V L ++ KCG ISPRF V E W + LPS G +V+TT+ G+M H EA + +GG ++G+ Y Sbjct: 48 GEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130 The following BLAST results are available for this feature:
BLAST of CX308600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308600 ID=CX308600; Name=CX308600; organism=Citrus clementina; type=EST; length=294bpback to top |