CX308789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: CHEY_YERPE (Chemotaxis protein cheY OS=Yersinia pestis GN=cheY PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 295 LRVLVVDDDITVXRILEQMLRRC-LYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR----EEELKNIWQ 636 LR LVVDD T+ RI+ +L+ +NV ALN LR G FD V+SD +MP+MDG LL+ I G LPV+M++A+ + ++ + GA Y++KP EE+L I++ Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRA--GGFDFVVSDWNMPNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR8_ARATH (Putative two-component response regulator-like APRR8 OS=Arabidopsis thaliana GN=APRR8 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11 Identity = 54/227 (23.79%), Postives = 107/227 (47.14%), Query Frame = -2 Query: 25 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWN-----------ENKEHENSGSLEETDHHKRGSDEIE------YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 654 ++F + VL++D D T L +M+R+C Y V ++A I+ + D+VL++ + +M+ ++LLE I ++PV++ A + A++ + GA L KP+ E + K +WQ V ++ N +N ++ SL + E+E Y + +G + +A E+++G D KKP+++++ +L + + AV Sbjct: 8 ERFSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKYELLEKIRSICEIPVVVSGAHVK-DAIVECLCRGAKLCLEKPLMENDFKILWQFTVSRQRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDKYKDELGQGNKRKERADTDTGEHTEKNNG----SDLGDQKKPKLLFADDLQNETLEAV 229
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: CHEY_YEREN (Chemotaxis protein cheY OS=Yersinia enterocolitica GN=cheY PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 295 LRVLVVDDDITVXRILEQMLRRCLYN-VTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIR----EEELKNIWQ 636 LR LVVDD T+ RI+ +L+ +N V ALN LR G FD V+SD +MP+MDG LL+ I G LPV+M++A+ + ++ + GA Y++KP EE+L I++ Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRT--GGFDFVVSDWNMPNMDGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: AFSQ1_STRCO (Transcriptional regulatory protein afsQ1 OS=Streptomyces coelicolor GN=afsQ1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 40/131 (30.53%), Postives = 73/131 (55.73%), Query Frame = -2 Query: 238 VLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL 630 +L+++DD + LE L R + V T + L +LRE++ D+++ DV +P +DGF++ I LP+I+++A V+ G+ GA DY++KP++ L + V+R+ E+ + + GSL Sbjct: 4 LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQRP--DLIVLDVMLPGIDGFEVCRRIRRTDQLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGERESTDSASFGSL 132 The following BLAST results are available for this feature:
BLAST of CX308789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308789 ID=CX308789; Name=CX308789; organism=Citrus clementina; type=EST; length=655bpback to top |