CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.624e-11 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 2 Query: 116 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 K+++IG+SGVGKS+L+ RF + F+ E +TIGV+F S+ ID VK IWDTAGQ Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQ 70
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.624e-11 Identity = 28/68 (41.18%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 86 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +P D+ ++++IG GVGK++L+ RFT + F KST+GV+F +++ + K ++ QIWDTAGQ Sbjct: 33 QPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 100
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.624e-11 Identity = 28/68 (41.18%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 86 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +P D+ ++++IG GVGK++L+ RFT + F KST+GV+F +++ + K ++ QIWDTAGQ Sbjct: 34 QPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 101
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11 Identity = 25/60 (41.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ ++ ++++ QIWDTAGQ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7_PEA (Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11 Identity = 25/60 (41.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ ++ ++++ QIWDTAGQ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7_CENCI (Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11 Identity = 25/60 (41.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 110 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ ++ ++++ QIWDTAGQ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11 Identity = 28/63 (44.44%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR-IDNKVVKAQIWDTAGQ 289 D+LFK++++GD+ VGK++L+ R++++ F+ KST+GV+FA + L+ D ++V+ Q+WD AGQ Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB7L_HUMAN (Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11 Identity = 28/63 (44.44%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 104 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR-IDNKVVKAQIWDTAGQ 289 D+LFK++++GD+ VGK++L+ R++++ F+ KST+GV+FA + L+ D ++V+ Q+WD AGQ Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQ 67 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |