CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.533e-16 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQ Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.615e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 Y+Y+FK ++IGD GVGKS LL +FT+N+F +S TIGVEF TR + ++NK +K QIWDTAGQ Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.027e-16 Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 74 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 M+ PD YDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQ Sbjct: 1 MSTMNPD--YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.871e-16 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ +L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |