CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.028e-15 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 92 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 + EYDYLFKL+LIG+SGVGKS LL RF+ + + + STIGV+F +++ +D K VK QIWDTAGQ Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.028e-15 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 101 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 YDYLFKL+LIGDSGVGK+ L RF+++ FN STIG++F R++ +D K +K QIWDTAGQ Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.028e-15 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 89 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 PDE+YD+LFKLVL+GD+ VGK+ ++ RF F+ STIGV+F ++L I K VK QIWDTAGQ Sbjct: 11 PDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ 77
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.343e-15 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R+ ++ K VK QIWDTAGQ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 2.290e-15 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.290e-15 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 ++YD LF+L+LIGDSGVGK+ LL RFT NEF+ STIGV+F +++ +D V+ QIWDTAGQ Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.290e-15 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 ++YD LF+L+LIGDSGVGK+ LL RFT NEF+ STIGV+F +++ +D V+ QIWDTAGQ Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.290e-15 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 ++YD LF+L+LIGDSGVGK+ LL RFT NEF+ STIGV+F +++ +D V+ QIWDTAGQ Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.991e-15 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.991e-15 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 74 MAGYKP---DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 MAG P DE YD+LFKLVL+GD+ VGK+ ++ RF F+ STIGV+F ++L I K VK QIWDTAGQ Sbjct: 1 MAGPGPGDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ 75 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |