CX308926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.991e-15 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 74 MAGYKP---DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 MAG P DE YD+LFKLVL+GD+ VGK+ ++ RF F+ STIGV+F ++L I K VK QIWDTAGQ Sbjct: 1 MAGPGPGDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ 75
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.907e-15 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.907e-15 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 ++YD LF+L+LIGDSGVGK+ LL RFT NEF+ STIGV+F +++ +D V+ QIWDTAGQ Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 95 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 + YDYL KL+LIGDSGVGKS LL RF+++ F +TIG++F R++ +D K +K QIWDTAGQ Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 68
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +YDYL KL+LIGDSGVGKS LL RF+ F +TIG++F R++ +D K +K QIWDTAGQ Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQ Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQ Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +YD+LFKL++IGDSGVGKS+LL RF N F+ +TIGV+F R++ I+ + VK QIWDTAGQ Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.102e-15 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 98 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 +YDYL KL+LIGDSGVGKS LL RF+ F +TIG++F R++ +D K +K QIWDTAGQ Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
BLAST of CX308926 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.664e-15 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 92 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 289 DE +DYLFK++LIGDS VGK+ ++ F + ++TIGV+F RSL ID K VK Q+WDTAGQ Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76 The following BLAST results are available for this feature:
BLAST of CX308926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308926 ID=CX308926; Name=CX308926; organism=Citrus clementina; type=EST; length=291bpback to top |