CX309122

Overview
NameCX309122
Unique NameCX309122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length435
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig768 contig Ccv1_Contig768:786..1220. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.232e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGDF 118
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.915e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.915e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/75 (85.33%), Postives = 72/75 (96.00%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGIF 230
            IDKKKYLVP+DLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG F
Sbjct:   44 IDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGNF 118
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32
Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 3 
Query:    6 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224
            IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  +LPPTAA+MS+IYEE++DEDGFLY+TYSGENTFG
Sbjct:   44 IDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of CX309122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
ATG8_NEUCR2.232e-3286.67Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_PODAN2.915e-3286.67Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_COLLN2.915e-3286.67Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_PHANO4.973e-3287.67Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_PENCW4.973e-3287.67Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEOFI4.973e-3287.67Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_EMENI4.973e-3287.67Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_CHAGB4.973e-3285.33Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_ASPTN4.973e-3287.67Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR4.973e-3287.67Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionC21008G09Rv AbsLeaSub1 Citrus clementina cDNA clone C21008G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309122 ID=CX309122; Name=CX309122; organism=Citrus clementina; type=EST; length=435bp
TTGAAATTGACAAGAAGAAATATCTGGTTCCTGCTGATCTGACTGTTGGC
CAGTTTGTGTATGTGGTGCGAAAGAGGATCAAGCTCAGTCCTGAGAAGGC
TATTTTCATTTTTGTGAAAAACATTCTGCCACCCACTGCGGCAATGATGT
CTGCCATATATGAGGAAAACAGGGATGAAGATGGCTTCCTTTACATGACC
TACAGTGGGGAGAATACATTTGGGATCTTCTGAAGTGTGATCAAGCTACT
ATTATGTGAATAATGCTTCAAGAAGTTAGGTGAAGAAGGGGTTAAGTTGT
AAATAGTTCTATGTTCCATTAGTTTGGAATTTCTTTTAGTTAATGGTATT
ATATGTAACAACCTAAAAGTTGGGATCAGCAACTATTTACATAAAATTCA
ATAGTTTTCTCGAAAAAAAAAAAAAAAAAAAAAAA
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