CX309127

Overview
NameCX309127
Unique NameCX309127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:1141..1475. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 3.792e-55
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLI+LAI +NCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMD
Sbjct:  290 GLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMD 400          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 1.103e-54
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLID+AIR N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMD
Sbjct:  291 GLIDMAIRNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMD 401          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 1.441e-54
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLIDLAI+ N LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMD
Sbjct:  290 GLIDLAIKNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMD 400          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.151e-54
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLID+AIR N LIGGDDFKSGQTKMKSVL DFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMD
Sbjct:  291 GLIDMAIRNNVLIGGDDFKSGQTKMKSVLGDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMD 401          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.060e-49
Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLI LA  +N  I GDDFKSGQTK+KSVLVDFLVGAGIKP SI SYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV+SN +LYGP EHPDHVVVIKYVPYVGDSKRAMD
Sbjct:  291 GLIQLAEEKNVFIAGDDFKSGQTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYGPDEHPDHVVVIKYVPYVGDSKRAMD 401          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 2.015e-48
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G I+LAIR N  IGGDDFKSGQTK+KSVL+DFLV AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMD
Sbjct:  284 GAIELAIRHNVFIGGDDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMD 394          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.657e-48
Identity = 92/111 (82.88%), Postives = 98/111 (88.29%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G I+LA++ N  IGGDDFKSGQTK+KSVL+DFLV AG+KP SIVSYNHLGNNDG NLSAPQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMD
Sbjct:  284 GAIELAVQNNVFIGGDDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMD 394          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.910e-47
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 2
Query:    5 LIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            ++DLAI+ N  IGGDDFK+GQTK+KSVL D+LV AGIKP SIVSYNHLGNNDG NLSAPQ FRSKEI+KSNVVDDM++SN ILY  GEHPDHV+VIKYVPYVGDSKRAMD
Sbjct:  291 VVDLAIQHNVSIGGDDFKTGQTKIKSVLTDYLVSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEITKSNVVDDMIASNNILYKQGEHPDHVIVIKYVPYVGDSKRAMD 400          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.924e-45
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G ++LA +R   +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+D
Sbjct:  287 GALELAWQRRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYAPGEEPDHCVVIKYVPYVGDSKRALD 397          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.765e-44
Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G ++LA +R   +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+D
Sbjct:  287 GALELAWQRRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPPQFRSKEVSKSSVVDDMVHSNPVLYSPGEQPDHCVVIKYVPYVGDSKRALD 397          
The following BLAST results are available for this feature:
BLAST of CX309127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO2_ARATH3.792e-5593.69Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_ARATH1.103e-5493.69Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_BRANA1.441e-5493.69Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU7.151e-5492.79Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_DROME4.060e-4985.59Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1B_XENLA2.015e-4884.68Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA7.657e-4882.88Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_DICDI2.910e-4780.91Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1_MACFA7.924e-4576.58Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_BOVIN1.765e-4475.68Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]

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Properties
Property NameValue
Genbank descriptionC21008H02Rv AbsLeaSub1 Citrus clementina cDNA clone C21008H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309127 ID=CX309127; Name=CX309127; organism=Citrus clementina; type=EST; length=335bp
AGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTGGTGGAGATG
ACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTTGATTTCCTT
GTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAACCACTTGGG
AAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCCGCTCCAAGG
AGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGCAATGGTATC
CTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCATCAAGTATGT
GCCATATGTTGGCGATAGCAAGAGAGCCATGGATG
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