CX309127

Overview
NameCX309127
Unique NameCX309127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:1141..1475. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.306e-44
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+D
Sbjct:  287 GALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALD 397          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.011e-44
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G ++LA +R+  +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+D
Sbjct:  287 GALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPYVGDSKRALD 397          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.136e-44
Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMD 334
            G ++LA +    +GGDDFKSGQTK+KSVLVDFL+G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+D
Sbjct:  287 GALELAWQHRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALD 397          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.158e-42
Identity = 94/112 (83.93%), Postives = 95/112 (84.82%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPYVGDSKRAMD 334
            GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN    G     P     IKYVPYV   +RAMD
Sbjct:  290 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNVFFMGLVNTRPRW---IKYVPYVA-IERAMD 397          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.769e-36
Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMD 334
            GLI+LA + + LI GDDFKSGQTKMKSVL  FLV AGI+P SI SYNHLGNNDG NLS+PQ FRSKEISK++VVDD++ SN ILY    G   DH +VIKY+  VGDSK AMD
Sbjct:  307 GLIELAEKNDSLIAGDDFKSGQTKMKSVLAQFLVDAGIRPVSIASYNHLGNNDGYNLSSPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYMHAVGDSKVAMD 419          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.769e-36
Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYG--PGEHPDHVVVIKYVPYVGDSKRAMD 334
            G+I+LA + +  IGGDDFKSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLS+P+ FRSKEISK +VVDD++ SN +LY    G+  DH +VIKY+P VGDSK AMD
Sbjct:  296 GVIELAEKYDSFIGGDDFKSGQTKIKSVLAQFLVDAGIKPLSIASYNHLGNNDGYNLSSPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLPAVGDSKVAMD 408          
BLAST of CX309127 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 3.337e-35
Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 2
Query:    2 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMD 334
            GL+ LA      I GDD KSGQTK+KSVL  FLV AGIKP SI SYNHLGNNDG NLSAP+ FRSKEISKS+V+DD+++SN ILY    G+  DH +VIKY+  VGDSK AMD
Sbjct:  304 GLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMD 416          
The following BLAST results are available for this feature:
BLAST of CX309127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_RAT2.306e-4474.77Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_MOUSE3.011e-4474.77Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_HUMAN5.136e-4475.68Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_CITPA2.158e-4283.93Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_CANGA1.769e-3669.03Inositol-3-phosphate synthase OS=Candida glabrata ... [more]
INO1_CANAL1.769e-3667.26Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST3.337e-3566.37Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionC21008H02Rv AbsLeaSub1 Citrus clementina cDNA clone C21008H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309127 ID=CX309127; Name=CX309127; organism=Citrus clementina; type=EST; length=335bp
AGGGCTTATTGACTTGGCTATTAGGAGGAACTGTTTGATTGGTGGAGATG
ACTTCAAGAGTGGGCAGACTAAGATGAAATCTGTTTTGGTTGATTTCCTT
GTTGGGGCAGGAATCAAGCCAACATCAATTGTTAGCTACAACCACTTGGG
AAACAATGATGGAATGAATCTTTCAGCCCCTCAAACCTTCCGCTCCAAGG
AGATTTCCAAAAGTAATGTTGTTGATGACATGGTCTCCAGCAATGGTATC
CTTTATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCATCAAGTATGT
GCCATATGTTGGCGATAGCAAGAGAGCCATGGATG
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