DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 9.016e-41
Identity = 99/244 (40.57%), Postives = 147/244 (60.25%), Query Frame = 3
Query:   69 RRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            ++TR +     +  E D     G L+ F  + ++ AT+ F   N LG+GGFG+VYKG    G  VAVKRL   +TSG GE +F  EV +++   HRNL+ L GFC    E++LVY ++ N S+   + +    SL  LDW  R KI  G ARG+ YLH+     IIHRD+KA NILL ++  A + DFG+A++     T   T  + GT G+++PEY   G+ S K+DV+ +G+++LE+I+G++
Sbjct:  313 KKTRTNYEREPLTEESDDITTAGSLQ-FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLS--KTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSL--LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKK 551          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.177e-40
Identity = 94/221 (42.53%), Postives = 139/221 (62.90%), Query Frame = 3
Query:  138 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL--RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +L    +  +  AT+ FS+ N LG+GGFG VYKGRL DGK +AVKRL +    G + +F  EV +I+   H NL+ + G C    EK+L+Y Y+ N S+ S L  + R+S L   +W  R  I  G ARGL YLH+    +IIHRD+K +NILLD+     + DFG+A++ +  +T   T  V GT G+++PEY   G  SEK+DVF +G+++LE+++G++
Sbjct:  512 ELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTD-EFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKL---NWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKK 728          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.538e-40
Identity = 96/230 (41.74%), Postives = 136/230 (59.13%), Query Frame = 3
Query:  108 AEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            AE+   +      +F  + +  AT+ F   N LG+GGFG+VYKG    G  VAVKRL   +TSG GE +F+ EV +++   HRNL+ L G+C    EK+LVY ++ N S+   L +       LDW  R KI  G ARG+ YLH+     IIHRD+KA NILLD +    V DFG+A++     T   T  V GT G++APEY   G+ S K+DV+ +G+++ E+I+G +
Sbjct:  482 AENGDSITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLS--KTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQ-LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMK 708          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.623e-40
Identity = 89/220 (40.45%), Postives = 134/220 (60.91%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +R +  E+   T+ F  + +LG+GGFG VY G L D + VAVK L      G + +F+ EV+++    HRNL+GL G+C       L+Y YMANG +   +  ++     L W  R +IA+ +A+GL YLH  C P ++HRDVK  NILL+E + A + DFGL++      ++H++T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q   D
Sbjct:  554 RRITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLEDTQ-VAVKMLSHSSAQGYK-EFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGG-NVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTD 768          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.623e-40
Identity = 88/220 (40.00%), Postives = 133/220 (60.45%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            RF  R+L  AT+GF    ++G GGFG VY+G + +    +AVK++      G   +F  E++ +    H+NL+ L G+C    + LL+Y Y+ NGS+ S L  + + S   L W  R +IA G A GL YLHE  +  +IHRDVK +N+L+D +    +GDFGLA+L +      TT V GT+G++APE    G SS  +DVF +G++LLE+++G++  D
Sbjct:  350 RFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVR-EFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD 568          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.426e-40
Identity = 90/215 (41.86%), Postives = 137/215 (63.72%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +  L +L  AT+GF + NI+     G  YK  L DG  + VKRL        E QF++E+  +    H NL+ L GFC    E LLVY++MANG++ S+L++       +DWPTR ++A+G+ARGL++LH  C P  +H+ + +  ILLDE+F+A V D+GL KL+  +D+  ++  +G  G++APEY ST  +S   DV+G+GI+LLE++TGQ+
Sbjct:  282 KIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLSS-CCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQQWD-----IDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQK 490          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.426e-40
Identity = 91/219 (41.55%), Postives = 132/219 (60.27%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ---------FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK---LMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D    KN++G G  GKVYK  L  G++VAVK+L +    G +           F  EV+ +    H++++ L   C++   KLLVY YM NGS+A  L   +     L WP R +IAL +A GLSYLH  C P I+HRDVK++NILLD ++ A V DFG+AK   +   K     + + G+ G+IAPEY+ T R +EK+D++ +G++LLEL+TG++  D
Sbjct:  681 DCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTD 899          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 4.474e-40
Identity = 90/222 (40.54%), Postives = 136/222 (61.26%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTE--KLLVYRYMANGSVASRLRERQSSLPP----LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK---DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++  AT   S + ++G GG GKVYK  L +G+ VAVK++  +        F  EVK +    HR+L+ L G+C++ +E   LL+Y YM NGS+   L E +  L      LDW  R +IA+G A+G+ YLH  C P I+HRD+K++N+LLD   EA +GDFGLAK++      +T   T    + G+IAPEY  + +++EK+DV+  GI+L+E++TG+   D
Sbjct:  943 DIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTD 1164          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.844e-40
Identity = 93/243 (38.27%), Postives = 139/243 (57.20%), Query Frame = 3
Query:   78 RPHEFFFDVPAEDDSELQLGQLKR-FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            RP     +VP  +  E  +   KR F+  E+   T+ F    ++G GGFG V  G +   + VAVK L +  T G + +F+ EV ++    H NL+ L G+C       L+Y ++ NG +   L  +    P ++W TR +IA  +A GL YLH  C P ++HRDVK  NILLDE ++A + DFGL++      ++H++T + GT G++ PEY  T R SEK+DV+ +GI+LLE+IT Q   D
Sbjct:  545 RPSRPTMNVPYANSPEPSIEMKKRKFTYSEVTKMTNNFGR--VVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYK-EFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGK-PIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVID 783          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.844e-40
Identity = 92/216 (42.59%), Postives = 124/216 (57.41%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            L ++  ATD  + K  +GRG  G VY+  L  GK+ AVKRL              E+  I    HRNL+ L GF     + L++YRYM  GS+   L         LDW  R  +ALG A GL+YLH  C P I+HRD+K  NIL+D + E  +GDFGLA+L+D  D+ ++TA V GT G+IAPE         ++DV+ YG++LLEL+T +RA D
Sbjct:  817 LNKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVD 1030          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK4_ARATH9.016e-4140.57Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SRK6_BRAOE1.177e-4042.53Putative serine/threonine-protein kinase receptor ... [more]
CRK23_ARATH1.538e-4041.74Putative cysteine-rich receptor-like protein kinas... [more]
Y5188_ARATH2.623e-4040.45Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH2.623e-4040.00Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y1699_ARATH3.426e-4041.86Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH3.426e-4041.55Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
GSO1_ARATH4.474e-4040.54LRR receptor-like serine/threonine-protein kinase ... [more]
Y5596_ARATH5.844e-4038.27Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH5.844e-4042.59Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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