DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..1315. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 202.216 bits (513), Expect = 5.634e-51
Identity = 104/220 (47.27%), Postives = 145/220 (65.91%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            K  S  +L  +T+ F   NI+G GGFG VYK  L DGK VA+K+L  +     E +F+ EV+ +S A H NL+ L GFC    ++LL+Y YM NGS+   L ER      L W TR +IA G+A+GL YLHE CDP I+HRD+K++NILLDE F + + DFGLA+LM   +TH++T + GT+G+I PEY     ++ K DV+ +G++LLEL+T +R  D+
Sbjct:  720 KELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGD-CGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDM 938          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 7.358e-51
Identity = 109/231 (47.19%), Postives = 153/231 (66.23%), Query Frame = 3
Query:  117 DSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-----EKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            DS  +   L +FS  E++ AT+ FS  NI+GRGG+G V+KG L DG  VA KR K   ++GG+  F  EV++I+   H NLL L G+CT  T     ++++V   ++NGS+   L     +   L WP R++IALG ARGL+YLH    P IIHRD+KA+NILLDE FEA V DFGLAK      TH++T V GT+G++APEY   G+ +EK+DV+ +G++LLEL++ ++A
Sbjct:  260 DSMSESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKN-CSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEA--QLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKA 487          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 9.610e-51
Identity = 102/226 (45.13%), Postives = 147/226 (65.04%), Query Frame = 3
Query:  111 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +D   L+L  +  FSLR++++AT+ F + N +G GGFG VYKG+L DG ++AVK+L      G   +F  E+ +IS   H NL+ L G C    + LLVY ++ N S+A  L   Q +   LDWPTR+KI +G ARGL+YLHE    KI+HRD+KA N+LLD++    + DFGLAKL +   THI+T + GT G++APEY   G  ++K DV+ +GI+ LE++ G+
Sbjct:  600 KDFKSLEL-MIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNR-EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR 823          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.255e-50
Identity = 107/237 (45.15%), Postives = 155/237 (65.40%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTV-----TEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLD 842
            F + EL+ AT+ FS KN +GRGGFG VYKG L DG ++AVK++ E    G + +F+ EV+IIS   HRNL+ L G C+ V     +++ LVY YM+NG++   L  R +++  PL WP RK I L  A+GL+YLH    P I HRD+K  NILLD +  A V DFGLAK     ++H+TT V GT G++APEY   G+ +EK+DV+ +G+++LE++ G++A DL+   +    ++ D
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQG-DAEFRNEVEIISNLKHRNLVPLRG-CSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITD 517          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.639e-50
Identity = 107/240 (44.58%), Postives = 152/240 (63.33%), Query Frame = 3
Query:  123 ELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLD 842
            +LQ G    F+L++++ AT+ F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ +IS   H NL+ L G C    E LLVY Y+ N S+A  L   +     LDW TR KI +G A+GL+YLHE    KI+HRD+KA N+LLD    A + DFGLAKL D ++THI+T + GT+G++APEY   G  ++K DV+ +G++ LE+++G+   +      +E V LLD
Sbjct:  651 DLQTGS---FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKS--NTNYRPKEEFVYLLD 884          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.639e-50
Identity = 106/244 (43.44%), Postives = 157/244 (64.34%), Query Frame = 3
Query:   63 YWRRTRPHEFFFDVPAE-DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +W++ R      D+  E    +LQ G    F+LR+++ ATD F     +G GGFG VYKG L++GKL+AVK+L  +   G   +F  E+ +IS   H NL+ L G C    + +LVY Y+ N  ++  L  + +SS   LDW TRKKI LG A+GL++LHE    KI+HRD+KA+N+LLD++  A + DFGLAKL D  +THI+T + GT+G++APEY   G  +EK DV+ +G++ LE+++G+
Sbjct:  642 FWKKRRDKN---DIDKELRGLDLQTGT---FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNR-EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK 878          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 2.796e-50
Identity = 100/232 (43.10%), Postives = 154/232 (66.38%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVH---GTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDE 824
            + +  L +L  AT+ F   NI+  G  G +YKGRL DG L+ +KRL++ + S  E +F  E+K +    +RNL+ L G+C    E+LL+Y YMANG +  +L    + S  PLDWP+R KIA+G+A+GL++LH  C+P+IIHR++ +  ILL  EFE  + DFGLA+LM+  DTH++T V+   G  G++APEY  T  ++ K DV+ +G++LLEL+TGQ+A  +  ++ ++
Sbjct:  288 VSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRS--EKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEK 517          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 3.652e-50
Identity = 102/230 (44.35%), Postives = 149/230 (64.78%), Query Frame = 3
Query:  120 SELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD------THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + L++  +K F+  EL +ATD F++   +G+GG+GKVYKG L  G +VA+KR +E    G E +F TE++++S   HRNL+ L GFC    E++LVY YM NG++   +  +     PLD+  R +IALGSA+G+ YLH   +P I HRD+KA+NILLD  F A V DFGL++L    D       H++T V GT G++ PEY  T + ++K+DV+  G++LLEL TG +
Sbjct:  603 ASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQG-EKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKE--PLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQ 829          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 6.229e-50
Identity = 117/245 (47.76%), Postives = 150/245 (61.22%), Query Frame = 3
Query:  114 DDSELQLGQLK--RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLD 842
            DD E+    +K   F+  EL+ AT  F   N LG GGFG VYKG+L DG+ VAVK L      G + QF  E+  IS   HRNL+ L G C     +LLVY Y+ NGS+   L   ++    LDW TR +I LG ARGL YLHE    +I+HRDVKA+NILLD +    V DFGLAKL D K THI+T V GT+G++APEY   G  +EKTDV+ +G++ LEL++G+   D  +   DE   LL+
Sbjct:  667 DDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQG-KGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTL--HLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENL--EDEKRYLLE 906          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 6.229e-50
Identity = 111/227 (48.90%), Postives = 143/227 (63.00%), Query Frame = 3
Query:  114 DDSELQLGQLKR--FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            DD EL    +K   F+  EL+ AT  F   N LG GGFG VYKG L DG++VAVK L      G + QF  E+  IS  +HRNL+ L G C     ++LVY Y+ NGS+   L   ++    LDW TR +I LG ARGL YLHE    +I+HRDVKA+NILLD      + DFGLAKL D K THI+T V GT+G++APEY   G  +EKTDV+ +G++ LEL++G+
Sbjct:  668 DDEELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQG-KGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTL--HLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 891          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSKR1_ARATH5.634e-5147.27Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
RKF3_ARATH7.358e-5147.19Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH9.610e-5145.13Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH1.255e-5045.15Probable receptor-like protein kinase At1g11050 OS... [more]
Y5343_ARATH1.639e-5044.58Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH1.639e-5043.44Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH2.796e-5043.10Probably inactive leucine-rich repeat receptor-lik... [more]
Y1684_ARATH3.652e-5044.35Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH6.229e-5047.76Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH6.229e-5048.90Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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