DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..1315. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 6.229e-50
Identity = 98/212 (46.23%), Postives = 140/212 (66.04%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITG 785
            F+LR+++ ATD F+  N +G GGFG V+KG LADG++VAVK+L  +   G   +F  E+  IS   H NL+ L GFC    + LL Y YM N S++S L   +    P+DWPTR KI  G A+GL++LHE    K +HRD+KA NILLD++    + DFGLA+L + + THI+T V GT+G++APEY   G  + K DV+ +G+++LE++ G
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNR-EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 8.135e-50
Identity = 100/222 (45.05%), Postives = 145/222 (65.32%), Query Frame = 3
Query:  123 ELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +LQ G    F+L++++ AT+ F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ +IS   H NL+ L G C    E LLVY Y+ N S+A  L   +     LDW TR K+ +G A+GL+YLHE    KI+HRD+KA N+LLD    A + DFGLAKL + ++THI+T + GT+G++APEY   G  ++K DV+ +G++ LE+++G+
Sbjct:  649 DLQTGS---FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 866          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.388e-49
Identity = 98/209 (46.89%), Postives = 134/209 (64.11%), Query Frame = 3
Query:  174 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            AT  FSN N +G GGFG  YK  ++   + AVKRL   R  G + QF  E+  + M  H NL+ L G+  + TE  L+Y Y++ G++   ++ER  +   ++W    KIAL  AR LSYLHE C PK++HRD+K +NILLD  + A + DFGL+KL+    +H+TT V GT G++APEY  T R SEK DV+ YGI+LLELI+ +RA D
Sbjct:  257 ATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQ-QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAA--IEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALD 462          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.091e-49
Identity = 103/230 (44.78%), Postives = 147/230 (63.91%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            F+ +EL  AT  F +   LG GGFGKV+KG +    ++VA+K+L      G   +F  EV  +S+A H NL+ L GFC    ++LLVY YM  GS+   L    S   PLDW TR KIA G+ARGL YLH+   P +I+RD+K +NILL E+++  + DFGLAK+    D TH++T V GT G+ AP+Y  TG+ + K+D++ +G++LLELITG++A D      D+N++
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIR-EFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLV 319          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 3.091e-49
Identity = 99/237 (41.77%), Postives = 155/237 (65.40%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            F +P++DD  ++   +K F+L  ++ AT+ +  K ++G GGFG VY+G L DG+ VAVK ++   ++ G  +F  E+ ++S   H NL+ L G+C    +++LVY +M+NGS+  RL    S    LDWPTR  IALG+ARGL+YLH      +IHRDVK++NILLD+   A V DFG +K    + D++++  V GT G++ PEY  T + SEK+DVF +G++LLE+++G+   ++
Sbjct:  568 FSLPSKDDFFIKSVSVKPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNI 801          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.091e-49
Identity = 94/228 (41.23%), Postives = 154/228 (67.54%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            ++ +++    +  + ++I+G GGFG VYK  + DG + A+KR+ +    G +  F+ E++I+    HR L+ L G+C + T KLL+Y Y+  GS+   L +R   L   DW +R  I +G+A+GL+YLH  C P+IIHRD+K++NILLD   EA V DFGLAKL++ +++HITT V GT G++APEY+ +GR++EKTDV+ +G+++LE+++G+   D + +    N++
Sbjct:  292 YASKDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGEQL---DWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIV 515          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.091e-49
Identity = 104/214 (48.60%), Postives = 145/214 (67.76%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            FS   L+ ATD FS+KN LG+GG G VYKG L +GK VAVKRL        +  F  EV +IS   H+NL+ L G   T  E LLVY Y+AN S+   L  R+  + PL+W  R KI LG+A G++YLHE  + +IIHRD+K +NILL+++F   + DFGLA+L     THI+TA+ GT+G++APEY+  G+ +EK DV+ +G++++E+ITG+R
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVD-HFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKD-VQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKR 522          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.038e-49
Identity = 106/238 (44.54%), Postives = 151/238 (63.45%), Query Frame = 3
Query:  132 LGQLKR--FSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM 833
            LGQ+    F+ REL  AT  F     LG GGFG+VYKGRL + G++VAVK+L      G   +F  EV ++S+  H NL+ L G+C    ++LLVY +M  GS+   L +       LDW  R KIA G+A+GL +LH+  +P +I+RD K++NILLDE F   + DFGLAKL    D +H++T V GT G+ APEY  TG+ + K+DV+ +G++ LELITG++A D  M   ++N++
Sbjct:   66 LGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLV 302          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 6.887e-49
Identity = 98/237 (41.35%), Postives = 155/237 (65.40%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDL 803
            F +P++DD  ++   +K F+L  +++AT+ +  K ++G GGFG VY+G L DG+ VAVK ++   ++ G  +F  E+ ++S   H NL+ L G+C    +++LVY +M+NGS+  RL    +    LDWPTR  IALG+ARGL+YLH      +IHRDVK++NILLD    A V DFG +K    + D++++  V GT G++ PEY  T + SEK+DVF +G++LLE+++G+   ++
Sbjct:  567 FSLPSKDDFFIKSVSVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNI 800          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.004e-48
Identity = 103/227 (45.37%), Postives = 145/227 (63.88%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + +  +K ++  EL  AT  FS+ + +GRGG+GKVYKG L  G +VAVKR  E+ +  G+ +F TE++++S   HRNL+ L G+C    E++LVY YM NGS+   L  R     PL    R +IALGSARG+ YLH   DP IIHRD+K +NILLD +    V DFG++KL+       +  H+TT V GT G++ PEY  + R +EK+DV+  GI+ LE++TG R
Sbjct:  611 MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRA-EQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQ--PLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMR 834          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RKF1_ARATH6.229e-5046.23Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.135e-5045.05Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH1.388e-4946.89Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH3.091e-4944.78Probable serine/threonine-protein kinase RLCKVII O... [more]
NORK_MEDTR3.091e-4941.77Nodulation receptor kinase OS=Medicago truncatula ... [more]
FEI2_ARATH3.091e-4941.23LRR receptor-like serine/threonine-protein kinase ... [more]
CRK3_ARATH3.091e-4948.60Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
PBS1_ARATH4.038e-4944.54Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
NORK_PEA6.887e-4941.35Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5374_ARATH2.004e-4845.37Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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