DY259734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_ORYLA (Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 6.305e-42 Identity = 85/180 (47.22%), Postives = 120/180 (66.67%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTII + +NGGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +GG+++ LGG + QPFAI Y+YGF D ++ GMTKEE ++ VV ++LA+ RDG+SGGV VTI Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFAT-LGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 196
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_SALSA (Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.234e-42 Identity = 86/180 (47.78%), Postives = 121/180 (67.22%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G + QPFA+ Y+YGF D +++ M+KE+ +Q VV +SLA++RDG+SGGV VTI Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVY-VTLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_ONCMY (Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.234e-42 Identity = 86/180 (47.78%), Postives = 121/180 (67.22%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G + QPFA+ Y+YGF D +++ M+KE+ +Q VV +SLA++RDG+SGGV VTI Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 1.075e-41 Identity = 85/180 (47.22%), Postives = 119/180 (66.11%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L + +Y SGSAAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG + QPFAI ++YG+ D A+K GM+ EE + A++LA++RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.087e-41 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.087e-41 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.087e-41 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.087e-41 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 5.337e-41 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QPF I Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.460e-40 Identity = 81/180 (45.00%), Postives = 117/180 (65.00%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++Y SGSAAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ EGG++YG + G +I QPFAI Y+YG+ D A+K GM+ EE + A++LA+ RDG+SGGV+ TI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLATI 198 The following BLAST results are available for this feature:
BLAST of DY259734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259734 ID=DY259734; Name=DY259734; organism=Citrus clementina; type=EST; length=1086bpback to top |