DY259734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.729e-15 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 2 Query: 89 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE 658 N + GTT +GV G+VL ++ R + G ++A++ + K+ Q+ D V + +GS D+Q + V + ++ + T+K L+ LS N + +++GG DK G IY + +GG+I E + YG + ++E MT +E L ++A+ A RD ASG + V +I KE Sbjct: 3 NDKYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDK-NGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENI-DVVVITKE 192
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.030e-15 Identity = 49/187 (26.20%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF---LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE 658 GTT +G+T GVV + R S G +A++A+DKI ++ +++ +GS AD+Q++ Y++ + ++ + +++ AA L + ++++ + +QT ++GG D+ G KIY + G +I F YG + + + + +EA + ++A+ A+ RD SG + T+ +E Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQT--LLGGVDE-NGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEE 192
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.570e-15 Identity = 56/180 (31.11%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAAD----SQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + Y GG+++ DS+++ G YVA+R+ K+ ++T + +G AAD + + R + ++ + A K+ AN+V Y+ K + L G ++ GWDK G ++Y V GT + Y YG D +K M EEA +L +AV A RD SGG + Sbjct: 62 GTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIV----YSYKGYGLSMGTMITGWDK-TGPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAI 236
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.121e-14 Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGV 628 GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+ G Y GG + F++ Y YG D +K M+ EEA +L +++ A RDGASGGV Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSV-GSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGV 230
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.912e-14 Identity = 48/176 (27.27%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ DSR + G Y+++ +K+ ++ ++ SG AAD Q + + ++ G+ +V A+ L+ + Y + L G ++ GWDK +G +Y V GT + Y YG D ++ ++ EEA +L +A++ A RD SGG++ Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK-KGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGII 246
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 3.261e-14 Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV--RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ DSR S G Y+A +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK +G +Y V GT + Y YG D +++ ++ EEA L +A+ A RD SGGVV Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVV 246
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.258e-14 Identity = 50/186 (26.88%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE 658 GTT +G+ + V+L D R S G VA++ + K+ ++ D + + +GS D+Q + + + ++ G+ A L+ + ++++ F T +I+GG+D EG K++ + PLGG E+ F YG + + M+ EE +L + A+ A+ RD SG + ++ +I K+ Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGI-SLAVITKD 190
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 7.264e-14 Identity = 51/177 (28.81%), Postives = 86/177 (48.59%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ DSR + G Y+++ +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK +G +Y V GT + Y YG D +++ ++ EEA L +A++ A RD SGGVV Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVV 246
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 9.487e-14 Identity = 51/181 (28.18%), Postives = 92/181 (50.83%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTT +G+ GVVL AD+R S G + + KI ++ +++ + +G D + ++ + + +G+ +VK A L+ + +K F G +VGG+D E +++ V + G I E +A + Y D ++E M+ + +L VKA+++AI RD +G + VTI Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTI 188
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.113e-13 Identity = 48/189 (25.40%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 101 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE*AE 667 S GTTI+GV +N GVV+ AD+R++ G VA++ K+ +++ ++ +G+AAD++ V+ + + H++ + V A +++ + + + +IV G D G ++ + G+ + + WK+ +TKEEA +L A+ I D SG V + + + AE Sbjct: 27 STGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDP-TGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAE 214 The following BLAST results are available for this feature:
BLAST of DY259734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259734 ID=DY259734; Name=DY259734; organism=Citrus clementina; type=EST; length=1086bpback to top |