DY259734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 4.708e-13 Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GVV+ DSR + G Y+A++ K+ ++ ++ +G AAD + + ++ +P +V A+ L+ + Y K L G ++ GWDK G Y G I + FA+ Y YG D + M +EA +L +A+ A RD SGG V Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGTRIPGEAFAV-GSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSV 229
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB8_HUMAN (Proteasome subunit beta type-8 OS=Homo sapiens GN=PSMB8 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.049e-12 Identity = 50/176 (28.41%), Postives = 82/176 (46.59%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV+ DSR S G Y++ +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ + + L G ++ GWDK +G +Y V GT + Y YG D ++ ++ EEA L +A++ A RD SGGVV Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK-KGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVV 246
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_YEAST (Proteasome component PRE2 OS=Saccharomyces cerevisiae GN=PRE2 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 2.337e-12 Identity = 49/189 (25.93%), Postives = 88/189 (46.56%), Query Frame = 2 Query: 68 DLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 D + D + GTT + + GG+++ DSR + G +VA++ K+ ++ + +G AAD Q ++ H ++ + +V A+ ++ L Y K L G ++ G+ + EG IY V GT ++ + YG D +K ++ E+A L +++ A RD SGG V Sbjct: 62 DSRNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSV 250
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_THEAC (Proteasome subunit beta OS=Thermoplasma acidophilum GN=psmB PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.052e-12 Identity = 44/185 (23.78%), Postives = 87/185 (47.03%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE 658 GTT +G+T V++ + R + ++ ++ K+ Q+ + +G D+Q + Y++ L + +Q ++ A L+ +L+ ++VGG D ++ + G +E +A ++YG + + E MT +E LV++A+S A RD ASGG++ I K+ Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDT--APHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKD 190
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.052e-12 Identity = 46/202 (22.77%), Postives = 98/202 (48.51%), Query Frame = 2 Query: 47 ECFRGKMDLKMEDFNAPH--SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 E ++ + L+ + F P S GTTI+GV +VLGAD+R + G +A++ K+ ++ N++ +G+AAD++ V+ + + H++ + V A +++ + + + +++GG+D +G ++ + G+ + P+ + ++ + + EA +LV +A+ I D SG V I Sbjct: 13 EYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYD-CKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVI 213
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.986e-12 Identity = 53/187 (28.34%), Postives = 87/187 (46.52%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-------RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTT +G+ + GVVL AD R S G V + KI ++ +++ + +G D + +R + Q G+ +VK A L+ R+L Y +VGG+D E ++Y V + G I E + + Y D ++E + E ++ V+A++ AI RD SG + VTI Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPY------LAWFLVGGFD--EKPRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTI 188
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.206e-12 Identity = 49/176 (27.84%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ ADSR + G Y+A++ K+ ++ + +G AAD + + ++ + +V A+ L+ + Y K L G ++ GWDK G Y G I F++ Y YG D+ + + EEA L +A+ A RD SGG V Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSV 233
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12 Identity = 48/176 (27.27%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ ADSR + G Y+A++ K+ ++ + +G AAD + + ++ + +V A+ L+ + Y K L G ++ GWDK G Y G I F++ Y YG D+ + + E+A L +A+ A RD SGG V Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAV 233
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12 Identity = 49/176 (27.84%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ ADSR + G Y+A++ K+ ++ + +G AAD + + ++ + +V A+ L+ + Y K L G ++ GWDK G Y G I F++ Y YG D+ + + EEA L +A+ A RD SGG V Sbjct: 59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSV-GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAV 233
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12 Identity = 48/176 (27.27%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 631 GTT + + GV++ ADSR + G Y+A++ K+ ++ + +G AAD + + ++ + +V A+ L+ + Y K L G ++ GWDK G Y G I F++ Y YG D+ + + E+A L +A+ A RD SGG V Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAV 233 The following BLAST results are available for this feature:
BLAST of DY259734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259734 ID=DY259734; Name=DY259734; organism=Citrus clementina; type=EST; length=1086bpback to top |