DY259735

Overview
NameDY259735
Unique NameDY259735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1030
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9399 contig Ccv1_Contig9399:124..1153. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.038e-14
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 528
            +V +++  CG+CHTDL     +W      P++PGHE  G V E                     AC  C+ C +  E  C        S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.019e-14
Identity = 47/146 (32.19%), Postives = 66/146 (45.21%), Query Frame = 1
Query:   97 GDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            G + + +K+ Y G+CHTDL  +   W   +  P+V GHE AG V                       +C  CE C    +  C +  L  S    DGT     +  + +    +  + P  +PLDAAAP+LCAGITVY  LK  G+
Sbjct:   30 GPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQL--SGYTVDGT-----FQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGV 168          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.268e-12
Identity = 46/144 (31.94%), Postives = 64/144 (44.44%), Query Frame = 1
Query:   91 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            E    ++ + V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK
Sbjct:   31 EPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.268e-12
Identity = 46/144 (31.94%), Postives = 64/144 (44.44%), Query Frame = 1
Query:   91 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            E    ++ + V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK
Sbjct:   31 EPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.164e-12
Identity = 43/149 (28.86%), Postives = 63/149 (42.28%), Query Frame = 1
Query:   91 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPG----HEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            E GD +V + + + G+CH+D   + N W    FP  PG    HE  G+V +                       AC  C  C +  +  C             G  T G +  +++   +Y+   PD +P   AAPLLCAG+TVY+ LK
Sbjct:   32 EPGDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLCFNQ-------KVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK 173          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.820e-12
Identity = 44/139 (31.65%), Postives = 60/139 (43.17%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            ++ + V Y G+CHTDL   + +W      P+V GHE AG V                       +C SCE C    E  CPK  L+       G    G +  +  A+     R P ++ L   AP+LCAG+TVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLS-------GYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALK 164          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 6.295e-12
Identity = 44/139 (31.65%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK
Sbjct:   59 EILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 190          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.074e-11
Identity = 44/139 (31.65%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 164          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.074e-11
Identity = 45/139 (32.37%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C +CE C +  E  C K  L+       G    G +  +  A+     R P    L  AAP+LCAGITVY  LK
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLS-------GYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALK 164          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.392e-11
Identity = 44/139 (31.65%), Postives = 57/139 (41.01%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C  CE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAGITVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLS-------GYTHDGSFQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALK 164          
The following BLAST results are available for this feature:
BLAST of DY259735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ADH3_BACST1.038e-1430.28Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_EMENI3.019e-1432.19Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH5_YEAST1.268e-1231.94Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.268e-1231.94Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH2_EMENI2.164e-1228.86Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH1_KLUMA4.820e-1231.65Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH3_KLULA6.295e-1231.65Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_KLULA1.074e-1131.65Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH1_PICST1.074e-1132.37Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH2_PICST2.392e-1131.65Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259735 ID=DY259735; Name=DY259735; organism=Citrus clementina; type=EST; length=1030bp
TCACGAGAAGAAGAACATCCAGTAAAGGCCTTTGGGTGGGCAGCCCGAGA
CAGCTCCGGCCATCTCTCCCCATTCAAATTCTCCAGAAGGGAAACGGGTG
ATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGAT
CTCTCCAACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCC
TGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAA
AGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGC
CACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAAT
GATACTCACCTACAGTTCCATTAACACTGACGGAACAATCACATACGGAG
GCTACTCTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCT
GATAGCATGCCCCTTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTAC
CGTGTACAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATG
TAGGCATCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAATTTGCCA
AGGCTTTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCCAGAAG
ACTGAAGTTCTTGAACATCTTGGCCCTGATTCATTTTTGAAAACCCGTGA
CCCTGAACAATTGCAGGGTGCTATGGCCACTTGGATGGGATTATTGACAC
CGGGTCCCCCTGGGCCCCCATTTTGCCCTGGTCCGTCCATTAAATTCCCA
GGGCAGCTTGGTTCTGGTTGTGCCCCGAACACCCCCCCAACCTACCTTGA
ATTCCCTAATATGGGGAAAAAAAAGGGTTCGGGGACCCCCCCGGGGGAAA
AAAAAAACCCAAAAAAAATTAATTTCCCCAAAAACCAAAAAACCCCCAAA
CTTGGGGTTTTTTCAAGGTTTTTTCTAAACCCCAAGGGAAAGGTGGCCCC
GGGGGAAGGTCCCGACCATTTTTCCCTTAA
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