DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_TRYCR (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma cruzi GN=PEPCK PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.950e-54
Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEE-GVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSG-NRIKLAFTRRIIDAIHSGTLLEASYTKTP 689
            +D GV NIEGGCYAK I L+ + E DI++A++FG V EN V D+ T E+D+ D+S+ +NTR AYP+ +I  A    +  HPKN+I L  DAFGV+PPV++L+  Q M+ F+ GYTA V G E  G +  R  FS+CFG  F++ H T Y   LAEKMQKH +  WL+NTG++GG    G  R+ L  TR IIDAIH GTL    Y + P
Sbjct:  247 TDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHIEGALSKAIAGHPKNVIFLTNDAFGVMPPVARLTSAQAMFWFVMGYTANVPGVEAGGTRTARPIFSSCFGGPFLVRHATFYGEQLAEKMQKHNSRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTEYEEYP 455          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_TRYBB (Phosphoenolpyruvate carboxykinase [ATP], glycosomal OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.158e-54
Identity = 107/209 (51.20%), Postives = 136/209 (65.07%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEG-VKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSG-NRIKLAFTRRIIDAIHSGTLLEASYTKTP 689
            +D GV NIEGGCYAK I L+ E E DI+ A++FG V EN   D  T E+D+ D+S+ +NTR AYP+ +I  A    V  HPKNII L  DAFGV+PPV++L+  Q M+ F+ GYTA V G E G  +  R  FS+CFG  F++ H T Y   LAEKM+KH +  WL+NTG++GG    G  R+ L  TR IIDAIH GTL +A Y   P
Sbjct:  247 TDRGVFNIEGGCYAKAIGLNPETEKDIYEAVRFGAVAENCTLDRRTHEIDFNDESICKNTRVAYPLMHIDGALSKAVAGHPKNIIFLTNDAFGVMPPVARLTSAQAMFWFVMGYTANVPGVEAGSARVARPIFSSCFGGPFLVRHATHYGQQLAEKMEKHNSRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDQADYEVYP 455          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_BAUCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=pckA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.830e-52
Identity = 113/253 (44.66%), Postives = 156/253 (61.66%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPC-VGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQGYTP*SLGNPFQKKF 827
            ++G+ N+EGGCYAK I+L  E EP+I+ AI+   +LEN++       V+Y D S T+N R +YP+ +I N   P     H   II L  DAFGVLPPV+ L+ EQ  Y+F+SG++A ++GTE G+  P  TFSACFGAAF+ LHPT YAA+LA++M   G   +LVNTGW+    G+G+RI L  T+ II+AI +  + +    K P+F L  P  + GV S ILDP  ++  +   Q     SL   F K F
Sbjct:  273 NDGIFNLEGGCYAKTINLKPELEPEIFQAIRCNALLENVMV-RADGSVNYHDNSKTDNARVSYPLNHIKNRVQPVSCASHASTIIFLTADAFGVLPPVATLTNEQAQYYFLSGFSAKLSGTERGIISPVPTFSACFGAAFLALHPTVYAALLAKRMNIAGTNAYLVNTGWN----GNGSRIALKDTKAIINAILNKQIQDTPTIKLPIFNLSIPQILIGVDSNILDPRTSYINSSEWQNKAR-SLAQLFIKNF 519          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_WIGBR (Phosphoenolpyruvate carboxykinase [ATP] OS=Wigglesworthia glossinidia brevipalpis GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 6.306e-52
Identity = 108/234 (46.15%), Postives = 150/234 (64.10%), Query Frame = 3
Query:   75 NGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCV-GPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNE 773
            +GV N EGGCYAK I+LS EKEP+I+NAIK   +LEN++  + +  +++ D + TEN+R +YPI +I N   P     HPKNII L  DAFGV P VSKLS  Q  Y+F+SG+T+ ++GTE G+ +P  TFS+CFG AF+ LHPT YA +L   ++ + +  +LVNTGW+    G   R  L +TR II+AI    +        P+F L+ P +I+GVP   LDP   ++ NE
Sbjct:  275 DGVFNFEGGCYAKTINLSEEKEPEIFNAIKKNAILENVMVLKDSN-INFFDGTKTENSRVSYPINHIKNIVKPISQSGHPKNIIFLTADAFGVFPFVSKLSYFQGQYYFLSGFTSKLSGTERGIIDPEPTFSSCFGEAFLSLHPTVYAKILLRYIKYYNSKIFLVNTGWN----GKRERYSLEYTRSIINAILDDKIEFIDENYIPIFNLKIPKKIEGVPDLFLDPRNFFSSNE 503          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_TRYCR3.950e-5450.24Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_TRYBB5.158e-5451.20Phosphoenolpyruvate carboxykinase [ATP], glycosoma... [more]
PCKA_BAUCH2.830e-5244.66Phosphoenolpyruvate carboxykinase [ATP] OS=Baumann... [more]
PCKA_WIGBR6.306e-5246.15Phosphoenolpyruvate carboxykinase [ATP] OS=Wiggles... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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