DY259738

Overview
NameDY259738
Unique NameDY259738
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1040
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_GEOTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.885e-72
Identity = 128/238 (53.78%), Postives = 165/238 (69.33%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQ 782
            S  G+ NIEGGCYAKCI+LSREKEP I++AI FG VLEN++  + TR  DY D ++TENTRAAYP++ I N   P V  HP  I+ L  DAFGVLPP+SKL+ EQ MYHF+SGYT+ +AGTE GV EP ATFS CFGA F+     +YA ML +K+ +H    +LVNTGW+GG YG G+R+KLA+TR ++ A   G L      + P+FGL  P  + GVP ++L P+ TWA  +  +
Sbjct:  259 SSRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAVLENVILHDATRVPDYDDGTLTENTRAAYPLQAIKNIVDPSVAGHPSTIVFLTADAFGVLPPISKLTREQAMYHFLSGYTSKLAGTERGVTEPEATFSTCFGAPFLPRPAVEYAEMLGQKIAEHNVRVFLVNTGWTGGPYGVGSRMKLAYTRAMVQAAVEGELDNVETVQDPIFGLAIPAHVPGVPDDVLRPQNTWADKQAYE 496          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_PELPD (Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobacter propionicus (strain DSM 2379) GN=pckA PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 4.200e-72
Identity = 128/232 (55.17%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            D G+ N EGGCYAK I L  E EP+I+   + FGT+LEN+  +  TR VD  D S TENTRA+YP+ +IPN     +  HP NII+L CDA+GVLPP+S L+ EQ MYHF+SGYTA VAGTE GVKEP ATFS CFG  F+ L+PT Y  +L EK+ +H  + WLVNTGW+GG YG G RI+++++R +I+A   GTL + S+   P FGL  PT   GVPSE+L+P  TW+
Sbjct:  264 DKGLFNFEGGCYAKIIRLCPESEPEIFATTRRFGTILENVAINTRTRRVDLDDDSFTENTRASYPLTHIPNIVPSGIAGHPANIIMLTCDAYGVLPPISHLTKEQAMYHFLSGYTARVAGTEAGVKEPTATFSTCFGGPFMALNPTVYGELLREKISRHNVSCWLVNTGWNGGPYGVGERIRISYSRALINAALDGTLADGSFETDPFFGLAIPTSCPGVPSEMLNPRNTWS 495          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pckA PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 5.486e-72
Identity = 126/233 (54.08%), Postives = 166/233 (71.24%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            SD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI NA    +G HPKN+I+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE GV EP+ TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG+G R+ +  TR ++ A   G+L    + + P FG E P ++ GV +++LDP  TWA
Sbjct:  263 SDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYISNASESGLGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLSGVQFRRDPNFGFEVPVDLHGVDAKLLDPRSTWA 495          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pckA PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 5.486e-72
Identity = 126/233 (54.08%), Postives = 166/233 (71.24%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            SD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V+DE T E+D+ D S+T NTR AYP++YI NA    +G HPKN+I+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE GV EP+ TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG+G R+ +  TR ++ A   G+L    + + P FG E P ++ GV +++LDP  TWA
Sbjct:  263 SDRGTFNFEGGCYAKTINLSAEAEPEIYATTSKFATVVENMVYDEETLELDFNDDSLTANTRCAYPLDYISNASESGLGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLSGVQFRRDPNFGFEVPVDLHGVDAKLLDPRSTWA 495          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=pckA PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 7.164e-72
Identity = 128/233 (54.94%), Postives = 165/233 (70.82%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWA 764
            SD G  N EGGCYAK I+LS E EP+I+    KF TV+EN+V++E T E+D+ D S+T NTR AYP+EYI NA    +G HPKN+I+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE GV EP+ TFS CFGA F+   P  Y  +L EK+   GAT WLVNTGW+GG+YG+G R+ +  TR ++ A   G+L   ++ K P FG E PTE+ GV S +LDP  TWA
Sbjct:  263 SDKGTFNFEGGCYAKTINLSPEAEPEIYATTSKFATVVENMVYNEETLELDFDDDSLTANTRCAYPLEYISNASATGMGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKITSLGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLANVTFRKDPNFGFEVPTELHGVDSSLLDPRSTWA 495          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.723e-71
Identity = 125/232 (53.88%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            SD G  N EGGCYAK I L+ E EP+I+    KFGTV+EN+V+D  T+++D+ D S+T N R AYP+ YI NA     G HPKNII+L CDAFGVLPP+S+L+  Q MYHF+SG+T+ VAGTE GV EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG+G+R+ +  TR ++ A   G+L +A + K P FG + P ++ GVP  +LDP +TW
Sbjct:  263 SDTGTFNFEGGCYAKTISLNPEAEPEIYATTEKFGTVIENMVYDAETKDLDFEDDSLTANMRCAYPLHYISNASQAARGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIATHGATCWLVNTGWTGGAYGTGSRMPIKATRGLLTAALDGSLADAEFRKDPNFGFQVPVDVTGVPGILLDPRRTW 494          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 2.723e-71
Identity = 123/230 (53.48%), Postives = 164/230 (71.30%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            D G+ N EGGCYAKCI+L  E EP+I+ AIKFG+++EN+V D  TR++ Y D S+T NTR  YPI+YIPNA++  VG  PK +I L  D+FGVLPP+S+LS E  MYHF++G+TA +AGTE GVKEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+NTGWSGG+YG+G RI L +TR ++ A+ +G    A Y    +F L+ P    GVPSEI++P  TW
Sbjct:  255 DKGIFNFEGGCYAKCINLKEESEPEIYRAIKFGSLVENVVVDPITRKIQYEDASITPNTRVGYPIDYIPNAELSGVGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYGTGKRINLKYTRAMVTAVLNGYFDNAEYKHDDIFNLDIPQSCPGVPSEIMNPIDTW 484          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 4.644e-71
Identity = 124/232 (53.45%), Postives = 165/232 (71.12%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            SD G  N EGGCYAK I+L+ E EP+I+    KF TV+EN+VFDE T+E+D+ D S+T N R AYP+EYI NA +  +G HPKNII+L CDAFGVLPP+++L+  Q MYHF+SG+T+ VAGTE GV EP+ TFS CFGA F+   P  Y  +L +K+ +HGAT WLVNTGW+GG+YG G+R+ +  TR ++ A  +G+L  A + K   FG + P  + GV   +LDP +TW
Sbjct:  263 SDRGTFNFEGGCYAKTINLNPEAEPEIYATTTKFATVIENMVFDEETKELDFDDDSLTANMRCAYPLEYISNASVSALGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIARHGATCWLVNTGWTGGAYGVGSRMPIKATRALLTAALNGSLNNAEFRKDGNFGFDVPVSVPGVAEVLLDPRRTW 494          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_FLAJ1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=pckA PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 7.921e-71
Identity = 128/231 (55.41%), Postives = 163/231 (70.56%), Query Frame = 3
Query:   69 SDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTW 761
            ++N V N EGGCYAK I+L+ E EPDI+ AIK G +LEN+VF   T EVD+ D S+T+NTR +YPI +I N +   +G +PKNI  L  D+FG+LPP+SKL+  Q  YHFISGYTA VAGTE GV EP+  FSACFGA F+ LHPTKYA ML++KM+      WL+NTGW+GG+YG+G+R+KL +TR +I A  +G L    Y    VFG+  P     VPSEIL+P  TW
Sbjct:  264 AENTVFNFEGGCYAKVINLTEENEPDIFRAIKKGALLENVVFKAGTNEVDFDDVSITQNTRVSYPITHIDNIQPGSIGHNPKNIFFLTADSFGILPPISKLTPGQAAYHFISGYTAKVAGTEAGVTEPQPNFSACFGAPFMPLHPTKYAEMLSKKMKDADVKVWLINTGWTGGAYGTGSRMKLKYTRAMITAALNGELDNVEYVNHKVFGIAKPQSCPNVPSEILNPRNTW 494          
BLAST of DY259738 vs. ExPASy Swiss-Prot
Match: PCKA_GRAFK (Phosphoenolpyruvate carboxykinase [ATP] OS=Gramella forsetii (strain KT0803) GN=pckA PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.035e-70
Identity = 133/252 (52.78%), Postives = 170/252 (67.46%), Query Frame = 3
Query:   72 DNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGSGNRIKLAFTRRIIDAIHSGTLLEASYTKTPVFGLETPTEIKGVPSEILDPEKTWAGNEGLQGYTP*SLGNPFQKKF 827
            +N + N EGGCYAK I+LS E EPDI+ AIK G +LEN+  D +  +VD+ D ++T+NTR +YPI +I N + P  G +PKNI  L  DAFGVLPP+SKL+  Q  YHFISGYTA VAGTE GV EP  +FSACFGA F+ LHPT+YA ML++KM+      WLVNTGW+GG YG G+R+KL +TR +I +   G L    Y K  +FGLE P   +GVPSE+L+P  TW  ++         L N F+K F
Sbjct:  265 ENTIFNFEGGCYAKVINLSEENEPDIYKAIKPGAILENVALDANG-DVDFEDVTITQNTRVSYPINHINNIQKPSTGENPKNIFFLTADAFGVLPPISKLTPGQAAYHFISGYTAKVAGTEAGVDEPVPSFSACFGAPFMPLHPTEYAEMLSKKMKAADVNVWLVNTGWTGGPYGVGSRMKLKYTREMISSALEGKLENVDYEKHNIFGLEMPKTCEGVPSEVLNPRNTWK-DQNAYDLKAKELSNFFRKNF 514          
The following BLAST results are available for this feature:
BLAST of DY259738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOTN1.885e-7253.78Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_PELPD4.200e-7255.17Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobac... [more]
PCKA_RHOS45.486e-7254.08Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_RHOS15.486e-7254.08Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_RHOS57.164e-7254.94Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_ROSDO2.723e-7153.88Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]
PCKA_FUSNN2.723e-7153.48Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_SILPO4.644e-7153.45Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_FLAJ17.921e-7155.41Phosphoenolpyruvate carboxykinase [ATP] OS=Flavoba... [more]
PCKA_GRAFK1.035e-7052.78Phosphoenolpyruvate carboxykinase [ATP] OS=Gramell... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259738 ID=DY259738; Name=DY259738; organism=Citrus clementina; type=EST; length=1040bp
GATAATGGAGTATCTTTCCAGCAGTGCTCATCATCTCCAATTAAGTACCG
GTTATGATCAGTAGACAGAGTGATAATGGAGTATCAAACATTGAAGGCGG
GTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATATCT
GGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATGAG
CATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACTCG
TGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGATACCTTGTGTTG
GCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATGCATTTGGTGTA
CTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATGTACCACTTCAT
CAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGGTGTGAAGGAGC
CACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTATAATGCTACAC
CCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAGAAGCATGGGGC
TACTGGATGGTTGGTTAACACTGGCTGGTCAGGTGGAAGCTATGGGTCAG
GAAATCGTATTAAATTAGCTTTTACGAGAAGAATCATTGATGCAATACAT
TCTGGGACTCTTTTGGAGGCAAGCTACACAAAGACTCCAGTTTTTGGGCT
TGAGACCCCAACTGAGATAAAGGGAGTGCCCTCAGAAATCCTGGATCCAG
AAAAAACATGGGCCGGAAATGAAGGGCTACAGGGATACACTCCTTGAAGC
CTAGGAAACCCTTTTCAAAAAAAATTTTGAGGGGCTTTGGGAATCCACAG
AATTGGAAAGGAACACCAAGCCTTACCGGAGAGATTCCTGGCATCCGGCC
CCCTTTTCCTAATCAAAAGTCTTCAAAAACGAACCGGGGCGCCCAGGGGA
CACCAAAAAAATAAAAAAAAACCTTATTTCGCCAAGGCGAGCCATACGTG
TGGGTAAAACTAAAAAAAGCCCCCCTACCCCCTCCCGGGA
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