DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_CLOTE (Glutamate 5-kinase OS=Clostridium tetani GN=proB PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAV 521
            QL +L+++G+ +ILVSSGA+G G  +L             +KP++  + +A AAVGQ  L+  Y+ +F++   T  Q+L+T  D  DE       +T  +LLD RVIPI NENDAV
Sbjct:   42 QLVDLHNRGYNVILVSSGAIGAGVGKLGLS----------EKPKSIPEKQAAAAVGQGILLHTYEKIFAEYGKTIGQILLTKEDMIDEVRSCNATNTFNALLDKRVIPIINENDAV 147          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_PASMU (Glutamate 5-kinase OS=Pasteurella multocida GN=proB PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            QL +L+  GF +++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   Q+L+T +D  D +      DT+++LLD ++IP+ NENDAV+T
Sbjct:   34 QLAQLHQAGFRLVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQILLTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVAT 141          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YEAST (Glutamate 5-kinase OS=Saccharomyces cerevisiae GN=PRO1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 542
            E + +L   G ++I+VSSG + VG + +R  K          +P++  + +A AA+GQ  L+  +D LFSQ D   +Q+L+T +D  D    K   +T+  LL++ VIPI NEND +S R+  +
Sbjct:   39 ETVVKLRRMGHKVIIVSSGGIAVGLRTMRMNK----------RPKHLAEVQAIAAIGQGRLIGRWDLLFSQFDQRIAQILLTRNDILDWTQYKNAQNTINELLNMGVIPIVNENDTLSVREIKF 152          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_THIDA (Glutamate 5-kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  171 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            EQ+  L  QG E++LVSSGA+  G  RL ++K          K  NEL  +A AAVGQ  L+  Y+++F    + ++Q+L+T  D  D         T+++LL+LRV+PI NEND V+T
Sbjct:   38 EQIAALAEQGKEVVLVSSGAIAEGIARLGWKKR--------PKAVNEL--QAAAAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYLNARSTLRTLLELRVVPIINENDTVAT 146          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURS3 (Glutamate 5-kinase OS=Burkholderia sp. (strain 383) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTMLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURCM (Glutamate 5-kinase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_BURA4 (Glutamate 5-kinase OS=Burkholderia ambifaria (strain MC40-6) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T
Sbjct:   38 QIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVT 145          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBVY (Glutamate 5-kinase OS=Vibrio vulnificus (strain YJ016) GN=proB PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.363e-14
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  EL  QG  +++VSSGA+  GR+ L Y  L N+  +           +  AAVGQS L+  +++LF+   +   Q+L+T +D  D +      DT+ +L+D  +IP+ NENDAV+T
Sbjct:   43 QCAELKKQGHSVVVVSSGAIAAGREHLGYPALPNAMASK----------QLLAAVGQSQLIQTWESLFALYGIKIGQMLLTRADLEDRERFLNARDTINALVDNGIIPVVNENDAVAT 150          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_VIBVU (Glutamate 5-kinase OS=Vibrio vulnificus GN=proB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.363e-14
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  EL  QG  +++VSSGA+  GR+ L Y  L N+  +           +  AAVGQS L+  +++LF+   +   Q+L+T +D  D +      DT+ +L+D  +IP+ NENDAV+T
Sbjct:   43 QCAELKKQGHSVVVVSSGAIAAGREHLGYPALPNAMASK----------QLLAAVGQSQLIQTWESLFALYGIKIGQMLLTRADLEDRERFLNARDTINALVDNGIIPVVNENDAVAT 150          
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPY (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141          
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_CLOTE1.958e-1440.52Glutamate 5-kinase OS=Clostridium tetani GN=proB P... [more]
PROB_PASMU2.558e-1436.44Glutamate 5-kinase OS=Pasteurella multocida GN=pro... [more]
PROB_YEAST3.340e-1435.48Glutamate 5-kinase OS=Saccharomyces cerevisiae GN=... [more]
PROB_THIDA3.340e-1440.34Glutamate 5-kinase OS=Thiobacillus denitrificans (... [more]
PROB_BURS33.340e-1438.14Glutamate 5-kinase OS=Burkholderia sp. (strain 383... [more]
PROB_BURCM3.340e-1438.14Glutamate 5-kinase OS=Burkholderia ambifaria (stra... [more]
PROB_BURA43.340e-1438.14Glutamate 5-kinase OS=Burkholderia ambifaria (stra... [more]
PROB_VIBVY4.363e-1436.44Glutamate 5-kinase OS=Vibrio vulnificus (strain YJ... [more]
PROB_VIBVU4.363e-1436.44Glutamate 5-kinase OS=Vibrio vulnificus GN=proB PE... [more]
PROB_YERPY7.442e-1436.44Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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