DY259749

Overview
NameDY259749
Unique NameDY259749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPS (Glutamate 5-kinase OS=Yersinia pseudotuberculosis GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPP (Glutamate 5-kinase OS=Yersinia pestis (strain Pestoides F) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPN (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPG (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPE (Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERPB (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERP3 (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_YERE8 (Glutamate 5-kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHISS (Glutamate 5-kinase OS=Shigella sonnei (strain Ss046) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVAT 141
[Close]
BLAST of DY259749 vs. ExPASy Swiss-Prot
Match: PROB_SHIFL (Glutamate 5-kinase OS=Shigella flexneri GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  174 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 527
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVAT 141
The following BLAST results are available for this feature:
BLAST of DY259749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PROB_YERPS7.442e-1436.44Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERPP7.442e-1436.44Glutamate 5-kinase OS=Yersinia pestis (strain Pest... [more]
PROB_YERPN7.442e-1436.44Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPG7.442e-1436.44Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPE7.442e-1436.44Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3... [more]
PROB_YERPB7.442e-1436.44Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERP37.442e-1436.44Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERE87.442e-1436.44Glutamate 5-kinase OS=Yersinia enterocolitica sero... [more]
PROB_SHISS7.442e-1436.44Glutamate 5-kinase OS=Shigella sonnei (strain Ss04... [more]
PROB_SHIFL7.442e-1436.44Glutamate 5-kinase OS=Shigella flexneri GN=proB PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259749 ID=DY259749; Name=DY259749; organism=Citrus clementina; type=EST; length=919bp
CTTTTCCTTCTTCCTCTCCCCCACACAAAAACACACACATGATGGAATCT
TTCCAAGATCATACTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGT
TAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGG
GAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGC
TTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAG
GCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGC
CGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGT
CTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATC
CCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGC
AACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATT
TTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGTATC
TTGTTCCCTTCTGAATTAAAAATGAAACTTCCTGTGCATTTTTTTTTATT
AAAAATTCCTTTTCTTCCCCCTTGGGAATATTGAAATTTCCTTTTTCCTC
CCTTTTGGGACCTAAGGGGTTTGCCTACCTAGGTGAAATTTGTCCCCTTG
TGGAATATTTCTTATTCTTTATATTTAATTTCCATAAAAAACAAAAAACC
CAAGTGAAAAAAAAAAAACAAAAAAAACAAACCCAACCTTTCCTGCAAAA
ACCTCGGCAATACAAAAACTTTCTTCTTTACTTCTTTCTCCACCAACGGG
CCATTATAATACAATATAAACCCTCATTAACCATCGCACTCGTAATCCTC
AGAGCGCGTTCCCATTTGT
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