DY260161

Overview
NameDY260161
Unique NameDY260161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1037
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9470 contig Ccv1_Contig9470:52..1088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 2.440e-88
Identity = 162/235 (68.94%), Postives = 193/235 (82.13%), Query Frame = 1
Query:   34 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSD 738
            S+  RE+ VY+AKLAEQAERY+ MV+ MK+VA  D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+KGN    + IKEYRQK+E EL  IC DI+TV+++HLIP+A++ ES VF+YKMKGDYYRYLAEF  G++++ +A  S++           +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD
Sbjct:    2 STTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.066e-87
Identity = 161/234 (68.80%), Postives = 193/234 (82.48%), Query Frame = 1
Query:   37 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSD 738
            S  REN VY+AKLAEQAERY+EMV+ MK VA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE++GN   A  IKEYR+K+E ELSDIC+D+++V+++HLIP+A+ GES VF+YKMKGDYYRYLAEF  G+  KEAA +S++           +LPPT P+RLGLALNFSV YYEI++SPE ACHLAKQ FDEAISELD   EESY+D TLIMQLLRD+LTLWTSD
Sbjct:    2 SNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 235          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 2.698e-87
Identity = 167/249 (67.07%), Postives = 198/249 (79.52%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDL----PERWRKCPEGQ 774
            RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD+     E  ++ P+G+
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIKEAPKGE 257          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.749e-86
Identity = 158/233 (67.81%), Postives = 192/233 (82.40%), Query Frame = 1
Query:   49 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            E+ VY+AKLAEQAERY+EMV+ MK VA  D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE+KGN      IKEYRQK+E+EL+ IC+DI+ V+D+HLIPSA +GES VF++K+KGDY+RYLAEF  GD +K++A  S++           +LPPTHPIRLGLALNFSV YYEI+N+P++ACHLAKQAFD+AI+ELD   EESY+D TLIMQLLRD+LTLWTS   E
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSSEAE 236          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.749e-86
Identity = 165/242 (68.18%), Postives = 194/242 (80.17%), Query Frame = 1
Query:   28 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK+    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+ +++ HLIPSAS  ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD  E
Sbjct:    1 MSSESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAE 242          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 2.284e-86
Identity = 166/256 (64.84%), Postives = 197/256 (76.95%), Query Frame = 1
Query:   25 AMASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDL----PERWRKCPEGQ 774
            A  +   RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IK+YR K+E EL+ IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSV YYEI+NSP+RAC LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD+     E  +  P+G+
Sbjct:    2 AQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEMKDAPKGE 257          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.983e-86
Identity = 166/236 (70.34%), Postives = 194/236 (82.20%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAK-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV+ M+ VAK +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE +GNE +   IKEYR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDY+RYLAEFK G E+KEAA ++M            DL PTHPIRLGLALNFSV YYEI+NSP++AC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSDL E
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTE 238          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 2.983e-86
Identity = 165/244 (67.62%), Postives = 195/244 (79.92%), Query Frame = 1
Query:   22 SAMASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            SA A     EN VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IK+YR K+E+EL+ IC+ I+ +++ HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD+ E
Sbjct:    2 SAQAELSREEN-VYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISE 244          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 8.679e-86
Identity = 165/236 (69.92%), Postives = 192/236 (81.36%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAI+ELD   EESY+D TLIMQLLRD+LTLWTSD  E
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAE 243          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 1.480e-85
Identity = 164/236 (69.49%), Postives = 192/236 (81.36%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFD+AI+ELD   EESY+D TLIMQLLRD+LTLWTSD  E
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAE 243          
The following BLAST results are available for this feature:
BLAST of DY260161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
RAD24_SCHPO2.440e-8868.94DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
RAD25_SCHPO2.066e-8768.80DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
14335_ORYSJ2.698e-8767.0714-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433_TRIHA1.749e-8667.8114-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_MESCR1.749e-8668.1814-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433B_HORVU2.284e-8664.8414-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14333_ORYSJ2.983e-8670.3414-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_ORYSJ2.983e-8667.6214-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
1433A_HORVU8.679e-8669.9214-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14336_ORYSJ1.480e-8569.4914-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YI06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260161 ID=DY260161; Name=DY260161; organism=Citrus clementina; type=EST; length=1037bp
CCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTCCTCTAAAGAACGCGA
AAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAGCCGAGCGCTACGACG
AGATGGTGGATGCGATGAAAAATGTTGCGAAGCTTGATGTGGAATTGACG
GTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAAGAATGTAATTGGTGC
TCGAAGAGCATCGTGGAGGATACTTTCGTCAATTGAGCAAAAGGAAGAAG
CGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAGGAGTATAGGCAAAAG
GTTGAATCTGAATTGTCGGACATTTGCAATGATATCATGACTGTCATTGA
TGAGCATCTTATTCCTTCAGCAAGTGCTGGTGAATCAACTGTGTTCTTCT
ATAAGATGAAAGGAGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGC
GATGAGAAGAAAGAGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGC
TACCACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGATTGG
GTTTGGCTCTGAATTTCTCCGTCCTTTATTATGAGATCATGAATTCTCCT
GAAAGGGCTTGCCATCTTGCCAAACAAGCTTTTGATGAAGCTATTTCCGA
GCTGGACCCCCCTCACGAGGAGTCCTACCAAGACCGCACCTTAATTATGC
AGCTTCTTAGGGACCACCTTACCCTATGGACTTCTGACCTTCCCGAAAGA
TGGAGAAAATGCCCCGAAGGCCAATGGCCCTGCCCCAGCTGGGGGGGGGA
GAAGATGCCCAATTGACCCGGAAAGCCCTCCAGGGATTGCCTTTTGATTG
GGGGAAAAAAGGATGAAACCTTGTAAACCCACCTTAGTGGTTTGCCTAAA
GGGGCCCCTTGGCCCTTTTGCTCGCCGGTATTTCCATTTTAAAAAGTGGC
CTCATGGGGGGACGGGGCTTACTTTTTAGCCCAGGGGTGGGCCCCAAAAA
CCAAATGGGGCCGAACCTTGGCCCCGCCCCCCCCCCA
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