DY260161

Overview
NameDY260161
Unique NameDY260161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1037
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9470 contig Ccv1_Contig9470:52..1088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 2.138e-84
Identity = 158/236 (66.95%), Postives = 192/236 (81.36%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNV--AKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE FVY+AKLAEQAERY+EMV+ M+ V  A    ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   I++YR K+E+ELS+ICN I+ ++D  LIPSA+ G+S VF+ KMKGDY+RYLAEFK G E+K+AA +++            +LPPTHPIRLGLALNFSV YYEI+NSP+RAC LAKQAFDEAI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ +
Sbjct:    8 REEFVYMAKLAEQAERYEEMVEFMEKVTAAVESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGILKLLDSRLIPSAALGDSKVFYLKMKGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.792e-84
Identity = 161/237 (67.93%), Postives = 192/237 (81.01%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAK---LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV  M+ V+       ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE + K I+EYR K+ESELS+IC+ I+ ++D  LIPSASAG+S VF+ KMKGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ +
Sbjct:    3 REENVYMAKLAEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVKCIQEYRSKIESELSNICDGILKLLDSCLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 239          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 2.792e-84
Identity = 163/236 (69.07%), Postives = 193/236 (81.78%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAK-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV+ M+ VAK +DVE L+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE+KGNE +   IK+YR K+ESELS IC+ I+ V++ HLIPSAS  ES VF+ KMKGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC LAKQAFD+AI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ +
Sbjct:    4 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTD 239          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 312.383 bits (799), Expect = 2.792e-84
Identity = 156/240 (65.00%), Postives = 196/240 (81.67%), Query Frame = 1
Query:   34 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            +S  R+ FVY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   I++YR K+E+ELSDIC+ I+ ++D  L+P+A++G+S VF+ KMKGDY+RYLAEFK G E+K+AA +++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ +
Sbjct:    6 ASSARDEFVYMAKLAEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 245          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 3.646e-84
Identity = 158/238 (66.39%), Postives = 193/238 (81.09%), Query Frame = 1
Query:   37 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKG-NEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            S+ RE+ VY+AKLAEQAERY+EMV+ MK VA    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE+K  +E   + I+ YR K+E+EL+ I +DI++V+D HLIPSA+ GES VF+YKMKGDY+RYLAEF  GD +++A  +S++           +LPPTHPIRLGLALNFSV YYEI NSP++ACHLAKQAFD+AI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ E
Sbjct:    2 SQTREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISE 239          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 3.646e-84
Identity = 160/236 (67.80%), Postives = 192/236 (81.36%), Query Frame = 1
Query:   46 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            RE  VY+AKLAEQAERY+EMV+ M+ VA+     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IK+YR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSD+ E
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDINE 243          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 3.646e-84
Identity = 157/241 (65.15%), Postives = 195/241 (80.91%), Query Frame = 1
Query:   31 ASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDLPE 747
            ASS  RE FVY+AKLAEQAERY+EMV+ M+ VA+     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   I++YR K+ESELS IC+ I+ ++D  L+P+++ G+S VF+ KMKGDY+RYLAEFK G E+K+AA +++            +L PTHPIRLGLALNFSV YYEI+NSP+RAC+LAKQAFDEAI+ELD   EESY+D TLIMQLLRD+LTLWTSD+ +
Sbjct:    6 ASSSAREEFVYLAKLAEQAERYEEMVEFMEKVAEAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 246          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 4.762e-84
Identity = 161/237 (67.93%), Postives = 191/237 (80.59%), Query Frame = 1
Query:   37 SKERENFVYVAKLAEQAERYDEMVDAMKNVAK-LDV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDL 741
            S  RE  VY+AKLAEQAERY+EMV+ M+ VAK +D  ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN+ +   IK+YR K+E+ELS IC+ I+ ++D HL+P+AS  ES VF+ KMKGDY+RYLAEFK G E+KEAA +++            DL PTHPIRLGLALNFSV YYEI+NSP+RAC LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLW SD+
Sbjct:    2 SSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDI 238          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 6.220e-84
Identity = 164/239 (68.62%), Postives = 193/239 (80.75%), Query Frame = 1
Query:   28 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAK-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSD 738
            MA S   EN VY+AKLAEQAERY+EMV+ M+ VAK +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+ +++ HLIP AS  ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSV YYEI+NS +RAC+LAKQAFD+AI+ELD   EESY+D TLIMQLLRD+LTLWTSD
Sbjct:    1 MAESTREEN-VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of DY260161 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 8.123e-84
Identity = 167/267 (62.55%), Postives = 198/267 (74.16%), Query Frame = 1
Query:   28 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVLYYEIMNSPERACHLAKQAFDEAISELDPPHEESYQDRTLIMQLLRDHLTLWTSDL-----------PERWRKCPEGQWPCPS 789
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKE+++GN  +   IK+YR K+E+ELS IC+ I+ +++ HLIP+AS  ES VF+ KMKGDY+RYLAEFK G E+KEAA +++            DL PTHPIRLGLALNFSV YYEI+NS +RAC LAKQAFDEAISELD   EESY+D TLIMQLLRD+LTLWTSDL           P+  +K  E   P PS
Sbjct:    1 MSSDSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEAPKEVQKVDEQAQPPPS 267          
The following BLAST results are available for this feature:
BLAST of DY260161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
1433A_VICFA2.138e-8466.9514-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433B_TOBAC2.792e-8467.9314-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14333_ARATH2.792e-8469.0714-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14331_ARATH2.792e-8465.0014-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
BMH2_YEAST3.646e-8466.39Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433_LILLO3.646e-8467.8014-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14334_ARATH3.646e-8465.1514-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14337_ARATH4.762e-8467.9314-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433E_TOBAC6.220e-8468.6214-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
14335_ARATH8.123e-8462.5514-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YI06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260161 ID=DY260161; Name=DY260161; organism=Citrus clementina; type=EST; length=1037bp
CCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTCCTCTAAAGAACGCGA
AAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAGCCGAGCGCTACGACG
AGATGGTGGATGCGATGAAAAATGTTGCGAAGCTTGATGTGGAATTGACG
GTTGAGGAGCGCAACTTGCTCTCTGTTGGCTACAAGAATGTAATTGGTGC
TCGAAGAGCATCGTGGAGGATACTTTCGTCAATTGAGCAAAAGGAAGAAG
CGAAAGGGAATGAAGTGAATGCAAAGCGGATCAAGGAGTATAGGCAAAAG
GTTGAATCTGAATTGTCGGACATTTGCAATGATATCATGACTGTCATTGA
TGAGCATCTTATTCCTTCAGCAAGTGCTGGTGAATCAACTGTGTTCTTCT
ATAAGATGAAAGGAGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGC
GATGAGAAGAAAGAGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGC
TACCACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGATTGG
GTTTGGCTCTGAATTTCTCCGTCCTTTATTATGAGATCATGAATTCTCCT
GAAAGGGCTTGCCATCTTGCCAAACAAGCTTTTGATGAAGCTATTTCCGA
GCTGGACCCCCCTCACGAGGAGTCCTACCAAGACCGCACCTTAATTATGC
AGCTTCTTAGGGACCACCTTACCCTATGGACTTCTGACCTTCCCGAAAGA
TGGAGAAAATGCCCCGAAGGCCAATGGCCCTGCCCCAGCTGGGGGGGGGA
GAAGATGCCCAATTGACCCGGAAAGCCCTCCAGGGATTGCCTTTTGATTG
GGGGAAAAAAGGATGAAACCTTGTAAACCCACCTTAGTGGTTTGCCTAAA
GGGGCCCCTTGGCCCTTTTGCTCGCCGGTATTTCCATTTTAAAAAGTGGC
CTCATGGGGGGACGGGGCTTACTTTTTAGCCCAGGGGTGGGCCCCAAAAA
CCAAATGGGGCCGAACCTTGGCCCCGCCCCCCCCCCA
back to top