DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.765e-47 Identity = 91/147 (61.90%), Postives = 105/147 (71.43%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAVAVL GT V+G V+ +Q+ DGPTTV ++GL PG HGFH+H GDTTNGCMSTGPHFNP G HG P DE RHA A T+VDNQIP GPNS++GRA+VV DDLGKGGHELS TTGNAGGR+AC ++G Sbjct: 69 KAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 215
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.582e-45 Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV+VL GT V+G V+ +Q+ +GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIP GPNS++GRA+VV DDLGKGGHELS +TGNAGGR+AC ++G Sbjct: 52 KAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVG 198
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.524e-45 Identity = 89/147 (60.54%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAVAVL G V+G V+ SQ+ DGPTTV+ ++GL PG HGFH+H GDTTNGCMSTG HFNP HG P DE RHA A T+VDNQIP GPNS++GRA+VV DDLGKGGHELS TTGNAGGR+AC ++G Sbjct: 67 KAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 213
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 6.011e-45 Identity = 88/147 (59.86%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAVAVL G V+G V+ +QE + PTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIP GPNS+IGRA+VV DDLGKGGHELS +TGNAGGR+AC ++G Sbjct: 52 KAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVG 198
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.025e-44 Identity = 87/147 (59.18%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAVAVL GT V+G V+ +Q+ GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VD QIP GPNS++GRA VV DDLGKGGHELS +TGNAGGR+AC ++G Sbjct: 61 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVG 207
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.480e-43 Identity = 87/149 (58.39%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 ++KAVAV+ G VKG++ F Q+ G T V G ++GL PG HGFH+HALGDTTNGC STGPHFNP K+HG P D RHA A +V D QIP G +SI+GRAVVV D DDLG+ GHELSKTTGNAG RV C IIG Sbjct: 3 VIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTGHELSKTTGNAGARVRCGIIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 2.138e-42 Identity = 87/150 (58.00%), Postives = 98/150 (65.33%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +VKAV V+ G KGTV F QEG+G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH + D +I G NSIIGR VVV DPDDLGKGGHELSKTTGNAG R+ C +IG Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.792e-42 Identity = 83/136 (61.03%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 104 VKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 V+G V+ SQE +GPTTV L+GL PG HGFH+H GDTTNGCMSTG HFNP HG PED+ RHA A T+VDNQIP GP+S+IGRA+VV DDLGKGGHELS TTGNAGGR+AC ++G Sbjct: 2 VEGVVTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 137
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.220e-42 Identity = 86/147 (58.50%), Postives = 99/147 (67.35%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAVAVL GT V G V+ QE DGPTTV+ ++GL PG HGFH+H GDTTNGC+STG HFNP HG P D RHA A T+VD+QIP G NS++GRA VV DDLGKGGHELS TTGNAGGR+AC ++G Sbjct: 66 KAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 212
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 8.123e-42 Identity = 86/150 (57.33%), Postives = 98/150 (65.33%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +VKAV V+ G KGTV F QE +G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH + D++I G NSIIGR VVV DPDDLGKGGHELSKTTGNAG R+ C +IG Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIG 149 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |