DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40 Identity = 81/148 (54.73%), Postives = 93/148 (62.84%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV VL GT V GTV F Q DGP T+ GS++GL PG HGFHVHA GD TNGC+S GPH+NP K HG P+DE RH A F + D Q+ G SIIGR +VV DDLGKGG E S TGNAG R+AC +IG Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIG 148
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.457e-40 Identity = 82/149 (55.03%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV V+ GT GVKG V F+QE D GP V SGLK G HGFHVH GDTTNGC S G HFNP +EHG PED RH A + D I G +SIIGR +V+ + DDLG+GGHELSK TGNAGGR+AC +IG Sbjct: 1 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 7.603e-40 Identity = 84/150 (56.00%), Postives = 97/150 (64.67%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +VKAV V+ G KGTV F QE + P VSG + GL HGFHVH GD TNGCMS+GPHFNP GKEHG P DENRH ++ D++I FG +SIIGR VVV D DDLGKGGHELSK+TGNAG R+ C +IG Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKCLHGFHVHEFGDNTNGCMSSGPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 6.437e-39 Identity = 81/150 (54.00%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +VKAV V+ G VKGTV F Q+ P V+G ++GL G HGFHVH GD TNGC S GPHFNP G HG P D NRH + D I FG NSI+GR +VV DPDDLGKGGHELSKTTGNAG R+ C +IG Sbjct: 2 VVKAVCVINGD--VKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 9.294e-38 Identity = 80/148 (54.05%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV VL G+ VKGT++F Q+ G TV+G +SGL PG HGFH+H GD TNGC S+G HFNP + HG PED+ RH AT + D I G +SIIGRAVVV DDLGKGGHE SKTTG+AGGR++C +IG Sbjct: 3 IKAVCVLVGS--VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIG 148
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.071e-37 Identity = 79/149 (53.02%), Postives = 89/149 (59.73%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAV VL G+ VKG V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG P+D +RH A F D QI G SIIGR VV DDLGKGG + S TGNAGGR+AC +IG Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIG 148
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 2.704e-37 Identity = 78/149 (52.35%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAV VL G+ VKG V F Q+ +G +V G + GL G HGFH+H GD TNGCMS G HFNP K HG P D +RH A F + D+ I GPNSIIGR VV DDLGKGG++ S TGNAGGR+AC +IG Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHV-GDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLACGVIG 148
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 6.024e-37 Identity = 75/147 (51.02%), Postives = 90/147 (61.22%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+G + F Q+ +GP V G ++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A ++ D+ I G NSIIGR +VV PDDLGKGG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLACGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 7.868e-37 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = 2 Query: 68 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PEDE RH A ++ D+ I G +SIIGR +VV DDLGKGG+E SK TGNAGGR+AC +IG Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.753e-36 Identity = 78/148 (52.70%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL GT V GTV F+QEG+ P V+G ++GL PG HGFHVHA GD TNGC+S GPHFNP K HG P D RH A + D + G +SIIGR +V+ DDLGKGG+E S TGNAGGR+AC +IG Sbjct: 4 KAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLACGVIG 151 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |