DY260176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 1.389e-33 Identity = 73/147 (49.66%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+GT+ F +G V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD+ I G +SIIGR +VV PDDLG+GG+E S TGNA R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGH-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIG 149
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 2.369e-33 Identity = 76/151 (50.33%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAVL G + GTV+F Q + + PTTVS ++ G P GFHVH GD TNGC S GPHFNP GK HG PED RH A + D I G S++GR +VV DDLG+GG+E SK TGNAG R AC +IG Sbjct: 1 MVKAVAVLRGDSKITGTVTFEQADENSPTTVSWNIKGNDPNAKRGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQDKLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33 Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I G + IIGR +VV DDLGKGG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33 Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I G + IIGR +VV DDLGKGG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 6.893e-33 Identity = 70/147 (47.62%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 71 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G V+ T+ F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+DE RH A + D+ I G S+IGR +VV DDLGKGG++ S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIG 150
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 1.176e-32 Identity = 74/149 (49.66%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 71 KAVAVLGGTEG-VKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 KAV VL G VKG ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A+ ++ D+ I G + IIGR +VV DDLGKGG+E S TGNAG R+AC +IG Sbjct: 4 KAVCVLKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIG 152
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.536e-32 Identity = 75/151 (49.67%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAVL G V GTV F QE + PTT++ ++G GFH+H GD TNGC S GPHFNP GK HG P DE RH A +V D + GP+S+IGR VV+ DDLGKG +E S TGNAG R AC +IG Sbjct: 1 MVKAVAVLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.536e-32 Identity = 74/151 (49.01%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAVL G + GTV+F Q + + PTTVS +++G FHVH GD TNGC S GPHFNP GKEHG PEDENRH A + D I G S++GR +V+ DDLG+ H SK TGNAG R AC +IG Sbjct: 1 MVKAVAVLRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32 Identity = 76/151 (50.33%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 MVKAVAV+ G V G+V F QE + GPTT++ ++G G H+H GD TNGC S GPHFNP GK HG DENRH + TV DN I GP S+IGR VVV DDLGKG E S TGNAG R AC +IG Sbjct: 1 MVKAVAVVRGDSKVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTDNLIKLIGPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACGVIG 151
BLAST of DY260176 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32 Identity = 75/151 (49.67%), Postives = 87/151 (57.62%), Query Frame = 2 Query: 65 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPPFGPNSIIGRAVVVPRDPDDLGKGGHELSKTTGNAGGRVACRIIG 511 M KAVAVL G V G V+F Q + PTT++ +SG GFHVH GD TNGC S GPHFNP KEHG PED+NRH A + D + G NSI+GR VV+ DDLGKGG+ SK TGNAG R AC +IG Sbjct: 1 MAKAVAVLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQDLFVKLIGQNSILGRTVVIHAGTDDLGKGGNAESKKTGNAGARPACGVIG 151 The following BLAST results are available for this feature:
BLAST of DY260176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260176 ID=DY260176; Name=DY260176; organism=Citrus clementina; type=EST; length=895bpback to top |