DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCR1_DROME (Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.001e-24 Identity = 75/247 (30.36%), Postives = 123/247 (49.80%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSYTDST---SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVY-------------GGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKL---CQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 E + Y F+++ L +A+TH+SYT + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AV+HGF+KF RH + L+D + F + QE+ + ++ PK L D+ ESIA AI++D + L +W ++ ++ P + P+ L +L K GK + R+ R + V+ G+F IAK AA+ AL +L Sbjct: 1997 EESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVR-IQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTV-DVFCKGTF--RGIGRNYRIAKCTAAKCALRQL 2239
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_DANRE (Endoribonuclease Dicer OS=Danio rerio GN=dicer1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.251e-21 Identity = 79/297 (26.60%), Postives = 134/297 (45.12%), Query Frame = 3 Query: 21 KIMNPESFTLPRATVTDYRLLKEAMLTSLPSPEMEDAVFYV-------ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 K++ PE + + Y LK P+ E + ++ E+ INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ ++ P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1565 KVLPPEKQSSGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1860
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_CHICK (Endoribonuclease Dicer OS=Gallus gallus GN=DICER1 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 3.640e-21 Identity = 71/249 (28.51%), Postives = 118/249 (47.39%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 E INY+FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ ++ P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1669 EKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1916
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_MOUSE (Endoribonuclease Dicer OS=Mus musculus GN=Dicer1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 4.755e-21 Identity = 71/249 (28.51%), Postives = 118/249 (47.39%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 E INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ +++P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1664 EKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1911
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_HUMAN (Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 4.755e-21 Identity = 71/249 (28.51%), Postives = 117/249 (46.99%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 E INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ ++ P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1670 EKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1917
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_CRIGR (Endoribonuclease Dicer OS=Cricetulus griseus GN=DICER1 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 6.210e-21 Identity = 71/249 (28.51%), Postives = 117/249 (46.99%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 E INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ ++ P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1665 EKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1912
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_BOVIN (Endoribonuclease Dicer OS=Bos taurus GN=DICER1 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 1.807e-20 Identity = 71/249 (28.51%), Postives = 117/249 (46.99%), Query Frame = 3 Query: 144 ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 E INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ ++ P++ PV L ++ + K + + + +V V G IAK AAR AL L + P Sbjct: 1671 EKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPEITKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1918
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DICER_XENTR (Endoribonuclease Dicer OS=Xenopus tropicalis GN=dicer1 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.360e-20 Identity = 76/276 (27.54%), Postives = 126/276 (45.65%), Query Frame = 3 Query: 69 DYRLLKEAMLTSLPSPEMEDAVFYV-------ENIINYNFKNKRLLEEALTHSSY---TDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE-------------AVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 DY LK P+ E + ++ E INY FKNK L +A TH+SY T + YQRLEF+GDA L ++ +++ Q PG L+ LR+A ++ A +AVK+ ++K+ + + L + +F + + + + I+ PK + DI ES+A AIY+D L+ +W ++ +++P++ PV L ++ + K + + + +V V G IAK AAR AL L Sbjct: 1609 DYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEKKINYPFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRV-TVEVVGKGKFKGVGRSYRIAKSAAARRALRSL 1883
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_PHANO (Dicer-like protein 1 OS=Phaeosphaeria nodorum GN=DCL1 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.209e-18 Identity = 84/289 (29.07%), Postives = 133/289 (46.02%), Query Frame = 3 Query: 159 YNFKNKRLLEEALTHSS----YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEF---AEAVSQEDNTAV-YGGSI-KAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQ--QPQPVTLLFKLCQKNGKQVDIKHWR------------KNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMPVNCDV---CEIFDDIDEKFEI-EAAKQKLHELXRK 935 Y F+ RLL A H S + + SYQRLEF+GD+ L +A ++F YP DP L+ + +S + L V VK G++ ++ + A L +++++ E +E N AV Y S+ + PK LAD++E+ AAI+VD +FD + F L+P +TL+ + P T L +L N WR K + A V + + + A++ A+ AL KL P C+ D+ + + + EAA K EL R+ Sbjct: 1231 YRFRYPRLLRSAFIHPSQPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQIRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFFLDMTLDAYENFASNHPTTRLSRLLSIN---FGCSEWRMGALETETLIPGKGKAIAAMVMIHDKVHFHSLGQSGRYARVRASHAALEKLEGLPPYEFRSKYGCDCVDEGEGEAGVDEAAVSKKVELMRE 1516
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCR1_CAEEL (Endoribonuclease dcr-1 OS=Caenorhabditis elegans GN=dcr-1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 4.920e-18 Identity = 71/251 (28.29%), Postives = 113/251 (45.02%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDST---SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQED-----NTAVY------------GGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +E I Y FK + L +A TH+SY ++ YQRLEF+GDA L ++ Y+F Q PG L+ LR+A ++ A +AVK F K L +++F + S+ + N +Y I+ PK + DI ES+A AIY+D +L W + ++ + L P+ L + Q + ++ ++ K +V V + + IAK AA+ AL L Q Sbjct: 1581 LEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKLCSERNFDTNFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRGTIELCCANPPRSPIRELMEFEQSKVRFSKMERILESGKVRVTVEVVNNMRFTGMGRNYRIAKATAAKRALKYLHQ 1831 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |