DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_NEOFI (Dicer-like protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dcl1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 6.426e-18 Identity = 75/273 (27.47%), Postives = 123/273 (45.05%), Query Frame = 3 Query: 99 TSLPSPEMEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSY-----QRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSI-------KAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLLF----------KLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 T P +D +VE + Y+F RLL A+TH S + Y QRLEF+GD+ L + +F +P DP L+ + A +S + L ++VK GF++ + + L ++ + E + E A G++ PK L D+VE+ AI+VD FD Q + + F ++P +++ + P T L C K G+ I +A+V V G+ ++ A S AK+ A+ +AL L +P Sbjct: 1243 TEKPRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEI--ESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEVFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNYCLKAGELPTID--GAPAGVLAAVIVHGNVISEARSSSSRYAKVKASEKALAVLDGLLP 1511
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_COCIM (Dicer-like protein 1 OS=Coccidioides immitis GN=DCL1 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 6.426e-18 Identity = 70/256 (27.34%), Postives = 115/256 (44.92%), Query Frame = 3 Query: 126 DAVFYVENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAV-----SQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLE---PIVTLEELQQQPQPVTLLF----------KLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 D V+ + Y+FK +LL A TH SY + + YQRLEF+GDA L +A +++ +P DP L+ + A +S + L VAV+ G + + H + +L ++ + E + D + + PK L D+VE+ AI++D F + + F+ L+ +T+ + P T L C K G+ + + +A+V V VA + AKL A+ AL KL Sbjct: 1185 DLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRLAIDFGCSNYCLKAGEVPYVD--GPGTRVLAAVIVHDEVVAEGVASSSRYAKLKASEAALSKL 1438
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_ASPFU (Dicer-like protein 1 OS=Aspergillus fumigatus GN=dcl1 PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 8.393e-18 Identity = 76/263 (28.90%), Postives = 118/263 (44.87%), Query Frame = 3 Query: 123 EDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSY-----QRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYK----FVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIK-APKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLLF----------KLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 +D +VE + Y+F RLL A+TH S + Y QRLEF+GD+ L + +F +P DP LS + A +S + L ++VK GF++ F A + V+E A ++ Y K PK L D+VE+ AI+VD FD Q + F ++P +++ + P T L C K G+ I +A+V V G+ ++ A S AK+ A+ +AL L +P Sbjct: 1250 DDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIEAFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNYCLKAGELPTID--GAPATVLAAVIVHGNVISEARSSSSRYAKITASEKALAVLDGLLP 1510
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCR1_SCHPO (Protein Dicer OS=Schizosaccharomyces pombe GN=dcr1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.096e-17 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 138 YVENIINYNFKNKRLLEEALTHSSYTDST----SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAV----YGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI 587 Y+E I Y+FKNK+LL A H S +YQ+LEF+GDA L + Y++ YP G+L+ ++ + + L+ + +K+++H +AA+ D + E+ E + TA + I +PK ++D +E++ AI++D F LQ L + Sbjct: 1085 YIEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENPWFWFEIDSPKFISDTLEAMICAIFLDSGFSLQSLQFV 1242
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_ASPCL (Dicer-like protein 1 OS=Aspergillus clavatus GN=dcl1 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.432e-17 Identity = 77/258 (29.84%), Postives = 121/258 (46.90%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDST------SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDK----VKEFAEAVSQEDNTAVYGGSIK-APKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLLF----------KLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQSMP 842 VE + Y+F+ RLL A+TH S T ST YQRLEF+GD+ L + +F +P DP L+ + A +S + L +AVK GF+K ++ + L + V+E A ++ + Y K PK L D+VE+ AI+VD DF + + F+ ++P +++ + P T L C K G+ I +A+V V S V+ A++ AK+ A+ AL L +P Sbjct: 1253 VEEKLGYHFRYPRLLCSAVTHPS-TPSTWYFRVPCYQRLEFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEIETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQDMSIYDTFANKHPTTFLHNRLANEFGCTNYCLKAGEMPAIDGMPAG--VLAAVIVHNSVVSEATASSSRYAKIRASERALVVLDGLLP 1507
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL1_ASPNC (Dicer-like protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dcl1 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.442e-17 Identity = 68/251 (27.09%), Postives = 117/251 (46.61%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAE----AVSQEDNTAVYGGSIK-APKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPI---VTLEELQQQPQPVTLL----------FKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +E ++Y F+ LL A TH SY + + YQRLEF+GD+ + + +F +P DP L+ + A +S + L +AVK G + +++ +A L ++ ++AE A + + Y K PK L D+VE+ A++VD DF+ + + FR ++P + + + P T L C K G+ I +A+V V +A ++ AK+ A+ +AL L Sbjct: 1246 IEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFEDMAIYDTFANKHPTTFLHNRLTNEFGCVNYCLKAGEMPSID--GAPAGVLAAVIVHDVVIAEGTATSGRYAKVKASEKALAVL 1494
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_IDILO (Ribonuclease 3 OS=Idiomarina loihiensis GN=rnc PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.165e-17 Identity = 76/255 (29.80%), Postives = 120/255 (47.06%), Query Frame = 3 Query: 102 SLPSPEMEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTL-EELQQQPQPVTLLFKLCQKNGK---QVDI------KHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 SLP P + + +E I+ Y+F+ + LL +A+TH S ST +RLEF+GD+ LGL ++ ++ +P++ G LS +RAA + LA++ K G F+ L G + +LAD VE+I AIY+D D D + + EP +TL E Q P T L +L Q K + D+ H ++ N + ++ F + +S +K A+ AA AL L +S Sbjct: 2 SLPKPPLTE----LEKIVGYSFEQQGLLHQAMTHRS-ASSTHNERLEFLGDSILGLVIAEALYQKFPKVAEGDLSRMRAAIVCGRSLAKLGKKMGLGDFLSLGQGELK-------------------SGGYRRESILADAVEAIIGAIYLDSDMD--TIRQVILNWFEPQLTLIEPGTSQKDPKTRLQELLQARQKPLPEYDVVATQGQAHNQQFTVNCSVEGIESPFKGTGTSRRK--AEQAAATAALEHLQES 228
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HELPJ (Ribonuclease 3 OS=Helicobacter pylori J99 GN=rnc PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 7.105e-17 Identity = 65/233 (27.90%), Postives = 119/233 (51.07%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKV-LADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQS 836 +E + Y+FK+KRLLE+ALTH S + + +RLEF+GDA LGL + ++ + Q D G+LS LRA+ +S ++A ++R S++ K +E +S + G ++A + I++++ Y + DL+ L+M ++ L+EL Q V ++L Q+ G +++ ++Y+ A+A + K+ A+ A +AL KL ++ Sbjct: 21 LEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKAIALQDYLRVSSSEEISKGREKPSILSSAFEALMAGVYLEAGLAKVRKIIQNLLNRAYKRL--DLEHLFMDYK------TALQELTQAQFCVIPTYQLLQEKGPD-------HHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYQALQKLKEA 238
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOK5 (Ribonuclease 3 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rnc PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 7.105e-17 Identity = 73/254 (28.74%), Postives = 119/254 (46.85%), Query Frame = 3 Query: 120 MEDAVFY--VENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIV----------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 ME F+ VE +N +F +K L++ ALTHSSY + +R+EF+GD+ L L +S Y+FL Y G+L+ R+ + L VA K K+++ S K +E G + +LA+ VE+I AAIY+D + K ++I F+ ++E + L+E+ QQ + + + L + G RK V V + + S K+ ++ NAA++AL KL Sbjct: 1 MEKVNFFEEVEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLFLIYKSKSEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMS------KGEEIT-------------GGRERTSILANCVEAIIAAIYIDSGYKKTKQFIIDNFKDIIEKAIKNQIVLDYKTNLQEIVQQDGDIHIEYMLIKYEGPP-------HRRKFYTKVCVANNVMGSGVGYTKKESEQNAAQDALKKL 228
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOK1 (Ribonuclease 3 OS=Clostridium kluyveri (strain NBRC 12016) GN=rnc PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 7.105e-17 Identity = 73/254 (28.74%), Postives = 119/254 (46.85%), Query Frame = 3 Query: 120 MEDAVFY--VENIINYNFKNKRLLEEALTHSSYTDSTS----YQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIV----------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 ME F+ VE +N +F +K L++ ALTHSSY + +R+EF+GD+ L L +S Y+FL Y G+L+ R+ + L VA K K+++ S K +E G + +LA+ VE+I AAIY+D + K ++I F+ ++E + L+E+ QQ + + + L + G RK V V + + S K+ ++ NAA++AL KL Sbjct: 1 MEKVNFFEEVEKTLNISFNDKELIDTALTHSSYANGKKGVKFNERMEFLGDSVLQLCISEYLFLIYKSKSEGELTKKRSLIVCENSLYEVAKKWNIGKYIKMS------KGEEIT-------------GGRERTSILANCVEAIIAAIYIDSGYKKTKQFIIDNFKDIIEKAIKNQIVLDYKTNLQEIVQQDGDIHIEYMLIKYEGPP-------HRRKFYTKVCVANNVMGSGVGYTKKESEQNAAQDALKKL 228 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |