DY262448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACSK (Ribonuclease 3 OS=Bacillus clausii (strain KSM-K16) GN=rnc PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.629e-14 Identity = 69/242 (28.51%), Postives = 115/242 (47.52%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTD------STSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIV-------------TLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 F+N++LL +A THSSY + S+ +RLEF+GDA L LA+S Y+F Y + G ++ LRA+ + LAR A + F K V L K +E V GG + P +LAD+ E+ A+Y +D L+ ++M + P + L+E Q+ + + + Q+ G D R+ ++ V ++ + + + K+ A+ AA++AL L Q Sbjct: 44 FENRKLLIQAFTHSSYVNEQRIFSSSDNERLEFLGDAVLELAVSQYLFKTYKNMSEGDMTKLRASIVCEPSLARFAEELQFGKLV------LLGKGEE------------VTGGRTR-PALLADVFEAFIGALY--MDQGLEPVFMFLARFMYPKIKEGAFTYKMDFKSQLQEFVQRDNRGQIRYLIVQERGPAHD-------REFVSDVQLNEETIGTGTGRSKKEAEQLAAKQALLALNQ 257
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_BACSU (Ribonuclease 3 OS=Bacillus subtilis GN=rnc PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 9.602e-14 Identity = 68/242 (28.10%), Postives = 112/242 (46.28%), Query Frame = 3 Query: 153 INYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 I+ +F+N++LL +A THSSY + +RLEF+GDA L L +S ++F YP + G L+ LRAA + L +A + F V L K +E G K P +LAD+ E+ A+Y+D + + ++ F +++ L+E Q+ +L +K+ + G NR+ A V + G + + K+ A+ +AA+EAL KL Sbjct: 27 ISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLV------LLGKGEEMT-------------GGRKRPALLADVFEAFIGALYLDQGLEPVESFLKVYVFPKINDGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEKGP-------AHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKL 242
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_MYCMS (Ribonuclease 3 OS=Mycoplasma mycoides subsp. mycoides SC GN=rnc PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.254e-13 Identity = 73/238 (30.67%), Postives = 108/238 (45.38%), Query Frame = 3 Query: 159 YNFK--NKRLLEEALTHSSYTDST----SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKH------WRKNRKNI---ASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 YN K N++L EALTH+SY + SYQRLEF+GDA L + +S ++F Y +L G+L+ LRA+ + E L RVA V+ K E P +LAD+ E++ AAIY+D D W + + L + I + + L +L Q K+ D+K+ + N I SV ++G K+ A+ NAA + L KL Sbjct: 10 YNIKINNEKLFNEALTHNSYANEHKLKYSYQRLEFLGDAILQMYVSRFLFFNYSKLSEGELTRLRASTVREETLFRVAKDINLGALVKLGHGEYITKGYE-------------------KPSILADVFEALTAAIYLDQKEDGLVTW-LGQTLFKYIKDSNFINDTKDFKSELQELLQSE-KRSDLKYIIEKEDFFANENKILYTVSVNLNGQKFGVGKGFSKQEAEQNAASDCLSKL 226
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: DCL4_ARATH (Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.254e-13 Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYT--DSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKV 509 +EN ++Y F +K LL +A H SY YQRLEF+GDA L +++Y F +P+L PGQL+ LR+ +++ E LA VAV +F+ + L + ++++ ++ + + PK+ Sbjct: 1224 LENQLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKI 1348
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICBR (Ribonuclease 3 OS=Rickettsia bellii (strain RML369-C) GN=rnc PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.638e-13 Identity = 67/245 (27.35%), Postives = 111/245 (45.31%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +E +++Y+FKNK LL EAL+H S Y + Y+RLEF+GDA L L ++ +F + + + G L+ +R+ + E + V K G ++ + E ++ G P + ++ E++ AAIY+D D + KLW F + +P L+E Q +++L ++ G + H SV ++G KE A+ NAARE L KL Sbjct: 7 LEKLLDYSFKNKALLTEALSHPSLRQHHEYKANKDYERLEFLGDAVLNLIITEILFNNFKEYNEGNLAKIRSYLVCKETICVVGAKLGLKNYI----------IMTHGEEIA---------GGRDNPNNIENVTEALIAAIYLDSDITTIHNIIGKLWAEFIKVKDLTDYDPKTALQEWAQSKDHHIPIYRLIKREG----VAHL---STFTVSVKINGYEQTGKGHSIKE-AEKNAARELLHKL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_RICB8 (Ribonuclease 3 OS=Rickettsia bellii (strain OSU 85-389) GN=rnc PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.638e-13 Identity = 67/245 (27.35%), Postives = 111/245 (45.31%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSS------YTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFD-----LQKLWMIFRGL-----LEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 +E +++Y+FKNK LL EAL+H S Y + Y+RLEF+GDA L L ++ +F + + + G L+ +R+ + E + V K G ++ + E ++ G P + ++ E++ AAIY+D D + KLW F + +P L+E Q +++L ++ G + H SV ++G KE A+ NAARE L KL Sbjct: 7 LEKLLDYSFKNKALLTEALSHPSLRQHHEYKANKDYERLEFLGDAVLNLIITEILFNNFKEYNEGNLAKIRSYLVCKETICVVGAKLGLKNYI----------IMTHGEEIA---------GGRDNPNNIENVTEALIAAIYLDSDITTIHNIIGKLWAEFIKVKDLTDYDPKTALQEWAQSKDHHIPIYRLIKREG----VAHL---STFTVSVKINGYEQTGKGHSIKE-AEKNAARELLHKL 224
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_HYDS0 (Ribonuclease 3 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rnc PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.638e-13 Identity = 60/193 (31.09%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 126 DAVFYVENIINYNFKNKRLLEEALTHSSYTDST-SYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI----FRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQ 689 D+ +E I Y FK+K L+++A TH S++ S+ +Y+ LEF+GDA + N + A+P G+LS L++ IS E LA +A F K++ L K +E GS K P +L D+ E+ AAIY+D +D + + F+ + +V L+Q + T L ++ QK K+ Sbjct: 2 DSFELLEEKIGYRFKDKNLVKKAFTHISFSKSSENYEVLEFLGDALVNFMTVNILVEAFPNKKEGELSQLKSFLISEEFLASLAKSLNFEKYI------LISKGEELK-------------GSNKNPSILCDVFEAFWAAIYIDSGYDCKLTKSLFEHHFKSQILEMVNSNSLKQDYK--TALQEITQKKWKE 173
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_CLOAB (Ribonuclease 3 OS=Clostridium acetobutylicum GN=rnc PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.638e-13 Identity = 71/250 (28.40%), Postives = 114/250 (45.60%), Query Frame = 3 Query: 117 EMEDAVFYVENIINYNFKNKRLLEEALTHSSYTDSTSY----QRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWMI--FRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHW-------RKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKL 827 E E + +E+ + F+N LL ALTHSSY + +RLEF+GDA L L++S Y F YP + G+L+ RA + L + + K++R S + GG + ++AD VE++ AAIY+D FD K +++ F G ++ V + + T L ++ Q GK DIK+ RK ++ D ++ K+ A+ +AA +AL L Sbjct: 2 EEERLLEELESKLGIEFQNINLLVTALTHSSYANENKNAEYNERLEFLGDAVLQLSISEYFFKKYPTISEGELTKKRALVVCGMSLHSIGERWQLGKYIRMS------------------HGEELTGGRTRV-SIIADCVEAVIAAIYLDKGFDTAKNFILREFEGTIQNAVENKIILDYK---TRLQEILQSKGK-TDIKYTLVRHEGPPHRRKFFVNLNFDNDVKSTGEGYTKKDAEQDAACKALKGL 228
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_ANOFW (Ribonuclease 3 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rnc PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.139e-13 Identity = 64/240 (26.67%), Postives = 111/240 (46.25%), Query Frame = 3 Query: 165 FKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-----------IFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 F+N++LL +A THSSY + +RLEF+GDA L L +S Y+F +PQ+ G+L+ +RAA + L A H+ + F + V + GG ++ P +LAD+ E+ A+Y+D + ++ F +++ L+E Q+ L +K+ Q+ G N++ ++ V ++G + K+ A+ AA+ AL KL Q Sbjct: 21 FRNEKLLIQAFTHSSYVNEHRKRLHEDNERLEFLGDAVLELTVSQYLFEQFPQMSEGELTKMRAAIVCEPSLVTFA----------HALS--------FGDLVLLGKGEELTGGRMR-PSLLADVFEAFIGALYLDQGIEAVVQFLGKTIFPKIREGAFSHVMDYKSQLQEFVQRDGSGVLEYKILQERGP-------AHNKEFVSRVSLNGEELGVGVGRSKKEAEQRAAQMALAKLKQ 234
BLAST of DY262448 vs. ExPASy Swiss-Prot
Match: RNC_STRS7 (Ribonuclease 3 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rnc PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.649e-13 Identity = 66/252 (26.19%), Postives = 114/252 (45.24%), Query Frame = 3 Query: 141 VENIINYNFKNKRLLEEALTHSSYTDS------TSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQLSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKAPKVLADIVESIAAAIYVDIDFDLQKLWM-------IFRGLLEPI----VTLEELQQQPQPVTLLFKLCQKNG----KQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALXKLAQ 833 +EN N F +KRLLE A TH+SY + + +RLEF+GDA L L +S Y+F YP+ G +S LR+ + E LA GF ++ A K +E G +L D+ E+ A+ +D + + ++ + +G E + L+EL Q V + +++ + G KQ ++ +V VD ++ + K++A+ +AA+ AL +L++ Sbjct: 8 LENSFNIRFDDKRLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLIISEYLFAKYPKQTEGDMSKLRSTIVREESLA------GFSRYCSFDAYIKLGKGEE-------------KSGGRHRDTILGDLFEAFLGALLLDKGIEEVRRFLNQVMIPQVEQGTFEKVKDYKTCLQELLQAKGDVVIDYQVISETGPAHAKQFEV-----------AVLVDEDRLSKGTGRSKKLAEQDAAKNALAQLSE 229 The following BLAST results are available for this feature:
BLAST of DY262448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262448 ID=DY262448; Name=DY262448; organism=Citrus clementina; type=EST; length=1334bpback to top |