DY262454

Overview
NameDY262454
Unique NameDY262454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:13..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.242e-53
Identity = 109/228 (47.81%), Postives = 148/228 (64.91%), Query Frame = 3
Query:   84 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 767
            T LFTSESV+EGHPDK+ DQISDA+LDA + QDP+ +VACE   K+ +V V GEITT A  + E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +E+GAGDQG MFGYA+ ET  FMP     A +L  +   +RKNG  PWLRPD K+QVT+ Y  ENG   PV    +++STQH   ++ + +   + + +IKP++P  +LD+ T F
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALISQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRY--ENGK--PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRF 224          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_AMOPS (S-adenosylmethionine synthetase OS=Amoeba proteus symbiotic bacterium GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.242e-53
Identity = 111/227 (48.90%), Postives = 156/227 (68.72%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            +FTSESV+EGHPDK+ DQISDAILDA L +DP ++VACET  KT +V+V GEITT A V+ E I R+  ++IG+ S D+G D  +C VL  I +QS DIAQGV    ++  + +GAGDQG MFGYA+ ET   MP     + +L A+  E+RKN   PWLRPDGK Q+T++Y  + G   PV + T++ STQH   +++ ++   ++E +IKPV+PE++L   T ++
Sbjct:    5 VFTSESVSEGHPDKIADQISDAILDAILAKDPLARVACETFVKTGMVLVGGEITTSAWVDVETITREVIKDIGYNSSDMGFDWASCSVLSAIGKQSLDIAQGVD---NRETKILGAGDQGLMFGYASRETDVCMPAPIAYSHRLMARQAELRKNNKLPWLRPDGKCQLTLKY--DQGK--PVAIDTIVFSTQHAPEISHKDLVEAVREEIIKPVLPEEWLSAATRYY 224          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROMS (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain AS9601) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 115/229 (50.22%), Postives = 156/229 (68.12%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKP 728
            M  F+FTSESV EGHPDK+CDQISDA+LDA L +DP+S+VACET   T L ++ GEIT+KA V+Y K+VR+  + IG+      G DA++C VLV +++QSPDI+QGV+          +  GAGDQG MFGYA DETPE MPL   LA +L  +L++VR      +L PDGKTQV+++Y N     VP+ ++T+LISTQH+   + +TN+E     I  DL ++V+ P
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNEADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLSKVRHENMLNYLLPDGKTQVSIDYKNG----VPLSINTILISTQHNPEIDGITNEEEIRQRIKEDLWKNVVLP 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_PROM9 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 117/229 (51.09%), Postives = 155/229 (67.69%), Query Frame = 3
Query:   78 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKP 728
            M  F+FTSESV EGHPDK+CDQISDA+LDA L +DP+S+VACET   T L ++ GEIT+KA V+Y K+VR+  + IG+      G DA++C VLV +++QSPDI+QGV+          +  GAGDQG MFGYA DETPE MPL   LA +L  +L +VR      +L PDGKTQV+++Y  E G  +PV ++T+LISTQH+   + +TN+E     I  DL  HV+ P
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDY--EKG--LPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIP 225          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 109/218 (50.00%), Postives = 151/218 (69.27%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 740
            + FTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++   + E +IKPV+P+
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKLREAVIEEIIKPVLPK 217          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 109/218 (50.00%), Postives = 151/218 (69.27%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 740
            + FTSESV+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++   + E +IKPV+P+
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKLREAVIEEIIKPVLPK 217          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_MICAN (S-adenosylmethionine synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 114/233 (48.93%), Postives = 153/233 (65.67%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKEHVIKPVIPE 740
            +LFTSESV EGHPDK+CDQISD ILDA L QD  S+VA E    T LV++ GEIT+KA V++  +VR     IG+++ D G  +++C VLV +++QSPDI+QGV      R        ++IGAGDQG +FG+A +ETPEFMPL   LA ++  +L  VRK G   +LRPDGKTQV+V Y  E+G   PV + T+L+STQHD T+           +I +DL E V++PV  +
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDALLSQDDHSRVAAEVVVNTGLVLITGEITSKAQVHFVDLVRKKIAEIGYINADNGFSSNSCTVLVALDEQSPDISQGVTAAQENRELLSNDELDKIGAGDQGIVFGFACNETPEFMPLPISLAHRIARRLAAVRKTGELSYLRPDGKTQVSVIY--EDGR--PVGIDTILVSTQHDATIGDITDNDLVQQKIKSDLWEAVVQPVFSD 233          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.622e-53
Identity = 116/229 (50.66%), Postives = 153/229 (66.81%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--DETVTNDEIAAD----LKEHVIKPVIPEKYLDE 755
            FLFTSESV+EGHPDK+ DQISDAILDA   +DP S+VA ET T T LV++ GEITT A+V+Y ++ RDT + IG+ + D G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA DETPE MP     A +L  +  ++RK+G  P+LRPD K+QVT+ Y +      P  + TV++STQH  D++ T   + A     + E +IKPV+P+++L E
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK----PHSIDTVVLSTQHHPDQSETATRMKASFIEAVIEEIIKPVLPKEWLQE 228          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.118e-53
Identity = 114/223 (51.12%), Postives = 147/223 (65.92%), Query Frame = 3
Query:   87 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 755
            FLFTSESV+EGHPDK+ DQISDAILDA L QD  ++VA ET   T LV++ GEITT ANV+Y  + R+T + IG+ + + G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     A +L  + +++R++G  PWLRPD K+QVTV Y +      P  V TV++STQH   ++ + I   + E +IKPV+P   L E
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIHVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSVDTVVLSTQHAPEMSQEAIREAVIEEIIKPVLPSHMLAE 222          
BLAST of DY262454 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.118e-53
Identity = 112/227 (49.34%), Postives = 149/227 (65.64%), Query Frame = 3
Query:   90 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 770
            +FTSESV+EGHPDKL DQISDA+LDA L  DP ++VACET  KT + +V GEITT A V+ E +VR   ++I + S +VG D D C V+  I +QS DIAQGV     ++PE+ GAGDQG MFGYA++ET   MP     + +L  +  E RK+G  PWLRPD K+QVT  Y  ENG +  V +  V++STQHD  VT  ++   + E ++K  +P + L + T FH
Sbjct:    6 IFTSESVSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHRLVQRQAEARKSGLLPWLRPDAKSQVTCRY--ENGKV--VGIDAVVLSTQHDPDVTQADLKEAVMELIVKHTLPAELLHKDTQFH 225          
The following BLAST results are available for this feature:
BLAST of DY262454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_COXBN1.242e-5347.81S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_AMOPS1.242e-5348.90S-adenosylmethionine synthetase OS=Amoeba proteus ... [more]
METK_PROMS1.622e-5350.22S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM91.622e-5351.09S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_POLSQ1.622e-5350.00S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS1.622e-5350.00S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_MICAN1.622e-5348.93S-adenosylmethionine synthetase OS=Microcystis aer... [more]
METK_ACIAC1.622e-5350.66S-adenosylmethionine synthetase OS=Acidovorax aven... [more]
METK_RALPJ2.118e-5351.12S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_MARAV2.118e-5349.34S-adenosylmethionine synthetase OS=Marinobacter aq... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100AB02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262454 ID=DY262454; Name=DY262454; organism=Citrus clementina; type=EST; length=772bp
CCCCTCTATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTA
CCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTC
AGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTT
TTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGC
TGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTG
ATGAGAAGACTATCTTCCATCT
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