DY262462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.177e-29 Identity = 79/191 (41.36%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE ++Y+E E+IH RWA+L GIL PE L G W +A GG YLG+P + + L ++ + + +E R + YPG +FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP++NLA HLADP NN Sbjct: 56 PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGG-LDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFV-QAIVTGKGPIQNLADHLADPGTNN 244
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.177e-29 Identity = 84/197 (42.64%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 141 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P + ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 60 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 250
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 88/223 (39.46%), Postives = 116/223 (52.02%), Query Frame = 3 Query: 75 AVSLPAAANATSKYA----MSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 A + PAA++ + Y + + GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P + ++ I + + + +E R DP YPGG FDPLG + DP+ F + KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 37 AKAKPAASSGSPWYGPDRVLYLGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP---LYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 82/194 (42.27%), Postives = 104/194 (53.61%), Query Frame = 3 Query: 141 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK---DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 G P P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I + + + VE R + E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL+ HLADP NN Sbjct: 63 GSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHLADPAVNN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 83/193 (43.01%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G P D+G+D L PE + +E E+IHCRWAML G + PE G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 83/193 (43.01%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 257
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 83/196 (42.35%), Postives = 103/196 (52.55%), Query Frame = 3 Query: 144 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 E P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I + + + +E R DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA H+ADP NN Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHIADPVANN 252
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29 Identity = 84/197 (42.64%), Postives = 105/197 (53.30%), Query Frame = 3 Query: 141 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG+P + ++ I + + + +E R DP YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 76 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPI---YPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29 Identity = 85/197 (43.15%), Postives = 105/197 (53.30%), Query Frame = 3 Query: 141 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 GEP P YL G PGD+G+D L PE + +E E+IH WAML G + PE L G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 4 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 194
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.423e-29 Identity = 82/193 (42.49%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG P V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HL+DP +NN Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLSDPVNNN 256 The following BLAST results are available for this feature:
BLAST of DY262462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262462 ID=DY262462; Name=DY262462; organism=Citrus clementina; type=EST; length=880bpback to top |