DY262462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.955e-20 Identity = 83/232 (35.78%), Postives = 110/232 (47.41%), Query Frame = 3 Query: 51 SSKSKFFTAVSLPAAANATSKY--------AMSADWMPGEPR------PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSME-KDPEKKK----------------------YPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 605 SS+S F + A + TS+ A W+P P +LDGS PGDFGFDPL LG+ P L+ Y+E+ELIH RWAMLAV GI V +A W +A A PG A P +GTL L + L + +VE +R ++ DP+ + YPGG FDPL ++ D K E K+ EIK+ RLA+LA + F Sbjct: 25 SSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEA---GADPGAVA-----PFSFGTL---LGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIF 245
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19 Identity = 69/185 (37.30%), Postives = 86/185 (46.49%), Query Frame = 3 Query: 132 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 W P P +L+G GD GFDP L P+ ER + +E+ H R AMLAV G LVP+ LG G W +A + A + L + + F + E YPG FDPL + D K EIKNGRLAL A +GF VQ+ G+ PL NLA HL P N Sbjct: 5 WFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYEAAQNAGI---------------GLKEVAIFTAAYGVFEVARGVKENSDPTTIYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQRHVVGGS-PLANLAEHLQQPLQRN 166 HSP 2 Score: 91.2781 bits (225), Expect = 7.911e-18 Identity = 67/189 (35.45%), Postives = 88/189 (46.56%), Query Frame = 3 Query: 132 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAF---VEHQR-----SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADP 674 W P P L G P D GFDPL L P+ R + +E+ H R AML G +VPE LG G W +A + +V G L + F+++A E+ R + +K + YPG FDPL + D + E+KNGRLAL A G Q A G PL NL+ HLA+P Sbjct: 190 WFPNAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAGD--SVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLA-TGESPLANLSAHLANP 350 HSP 3 Score: 90.1225 bits (222), Expect = 1.762e-17 Identity = 72/204 (35.29%), Postives = 90/204 (44.12%), Query Frame = 3 Query: 87 PAAANATSKYAMSAD---------WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRS------MEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 653 P AN T+ AM A W P P YL G A GD GFDP L P ER + +E+ HCR +MLA+ G LVPE LG G W Q W V + V+ +A +E+ R +++ + YPG FDPL + E K EIKNGRLA+ G V QS G P+ NL Sbjct: 350 PIGANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLGNGAWFQI--WDKVDFNR---------------FAVVALQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTT-----EYTKEAEIKNGRLAMNGMFGLEV-QSHVTGKSPINNL 528
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19 Identity = 82/237 (34.60%), Postives = 111/237 (46.84%), Query Frame = 3 Query: 18 IATTAFPSVLSSSKSKFFTAVSLPAAANATSKYA--MSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-----GLGN--WVQAQEWAAVPGGQATYLGTP--VPWGTLPTILVIEFLSIAFVEHQRSME---KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 I T F + ++KSK ++ + KY S +W P YL G PGD+G+D L PE + +E E+IH R AM A G + PE L G G W +A GG YLG P V ++ I + + + VE R + YP G+FD LG ++D + F E KVKE+KNGRLA+ + GF V Q+ LENLA HL +NN Sbjct: 34 IVTAGFTMLKHAAKSKVSSST-----CDRRVKYLGPFSGEW------PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFV-QAIVSRKDRLENLADHLGWTVNNN 256
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.155e-19 Identity = 72/201 (35.82%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 87 PAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQR-----SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADP 674 P A AT+ + W PG P +L G P D GFDPL + P R + SE+ H R +MLA+ G +VPE LG G W + +G V L IL+ A E+ R + +K + YPG FDPL + D Y +EIKNGRLA+ +G Q A G PL NLA H A+P Sbjct: 148 PVAMFATTGHKDGV-WFPGAQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFE--------------VGNSVDGIKLGFILM---AIAAPTEYWRGNGGFNWDKGTADRSYPG--FDPLKLTTD------YTKREIKNGRLAMTGLLGLTFQYLA-TGESPLANLAAHFANP 321
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18 Identity = 71/184 (38.59%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 153 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSME-KDPEKKK----------------------YPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 605 P +LDGS PGD+GFDPL LG+ P L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +GTL L + + + +VE +R ++ DP+ + YPGG FDPL + D +K E KV EIK+ RLA+LA + F Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGTL---LGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18 Identity = 82/251 (32.67%), Postives = 115/251 (45.82%), Query Frame = 3 Query: 18 IATTAFPSVLSSSKSKFFTA---------VSLPAAANATSKYAMSA-------DWMPGEPR------PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGTPVPWGTLPTILVIEFLSIAFVEHQRSME----------------KDPE-------KKKYPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 605 + TT+ +VL+ S F T + A ++ ++A W+P P +LDGS PGDFGFDPL LG+ P L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +G+L L + L + +VE +R ++ K E ++ YPGG FDPL + D +K E K+ EIK+ RLA+LA + F Sbjct: 1 MTTTSATAVLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGSL---LGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIF 240
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 489 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 104
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 489 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 489 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of DY262462 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 489 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 686 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 255 The following BLAST results are available for this feature:
BLAST of DY262462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262462 ID=DY262462; Name=DY262462; organism=Citrus clementina; type=EST; length=880bpback to top |