DY270367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_SIMCH (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Simmondsia chinensis PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.445e-43 Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 3 Query: 96 AACSPLVPNPAH---HRLTAASSTVRF--RQISAVAAPPKP-------KTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 A S +P H HR+ ASST+ ++I P P KTHSMPP+K+E+FKSLE WA NVL LKPVEKCWQPQ FLPDP F DQV+ LRERT +PD+Y VVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS AIW Sbjct: 15 AVTSSGLPRSYHLRSHRVFMASSTIGITSKEIPNAKKPHMPPREAHVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDPAS--EGFMDQVKELRERTKEIPDEYLVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIW 170 HSP 2 Score: 30.0314 bits (66), Expect = 2.445e-43 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 172 RAWTAEENRHGDLLNKYLYLTGRVDMKQIEK 202
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_RICCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.636e-42 Identity = 86/168 (51.19%), Postives = 107/168 (63.69%), Query Frame = 3 Query: 54 MQASQFLVTSTKPPAACSPLVPNPAHHRL----TAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 ++ + FL + K P+ P + + + T S + + PP+ THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQ FLPDP F +QVR LRER +PDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS AIW Sbjct: 3 LKLNPFLSQTQKLPSFALPPMASTRSPKFYMASTLKSGSKEVENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPAS--DGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIW 168 HSP 2 Score: 30.4166 bits (67), Expect = 7.636e-42 Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 514 PAHGLFGNRARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 P RA T EENRHGDL ++ + ++ M IEK Sbjct: 162 PTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEK 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_SOYBN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.296e-41 Identity = 82/135 (60.74%), Postives = 95/135 (70.37%), Query Frame = 3 Query: 141 TAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 T S + I PP+ THSMPP+K+E+F+SLE WA N+L LKPVEKCWQPQ FLPDP+ F +QV+ LRER LPDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS AIW Sbjct: 31 TLRSGSKEVENIKKPFTPPREVHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDPSS--DGFEEQVKELRERAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIW 163 HSP 2 Score: 30.0314 bits (66), Expect = 1.296e-41 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 165 RAWTAEENRHGDLLNKYLYLSGRVDMKQIEK 195
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.689e-41 Identity = 78/109 (71.56%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 207 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 THSMPP+K+E+FKSLE WA N+L LKPVE+CWQPQ FLPD F F +QVR LRER LPD+YFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS P AIW Sbjct: 62 THSMPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFLPDSA--FEGFHEQVRELRERAKELPDEYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIW 168 HSP 2 Score: 29.6462 bits (65), Expect = 1.689e-41 Identity = 14/31 (45.16%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M +EK Sbjct: 170 RAWTAEENRHGDLLNKYLYLSGRVDMRQVEK 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_SOLCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.201e-41 Identity = 88/160 (55.00%), Postives = 102/160 (63.75%), Query Frame = 3 Query: 66 QFLVTSTKPPAACSPLVPNPAHHRLTAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 Q + T+ +P CSPL T +V + +PP+ THSMPPEK E+F SL WA NN+L LKPVEKCWQ FLPDP F DQV+ LRER +PDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS P AIW Sbjct: 11 QSIKTTRRP---CSPLRSPRVFMASTLRPPSVEDGNVKKPFSPPREVHVQVTHSMPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFLPDPAS--EGFEDQVKELRERCKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIW 165 HSP 2 Score: 30.0314 bits (66), Expect = 2.201e-41 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 167 RAWTAEENRHGDLLNKYLYLSGRVDMRQIEK 197
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_CARTI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.737e-41 Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 3 Query: 141 TAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 T SST + PP+ THSMPP+K+E+FKS+E WA N+L LKPVEKCWQ Q FLPDP F +QV+ LR R +PDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS P A+W Sbjct: 36 TLGSSTPKVDNAKKPFQPPREVHVQVTHSMPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFLPDPAS--EGFDEQVKELRARAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAVW 168 HSP 2 Score: 31.187 bits (69), Expect = 3.737e-41 Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL T++ + ++ M I+K Sbjct: 170 RAWTAEENRHGDLLHTYLYLSGRVDMRQIQK 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_SOLTU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.077e-40 Identity = 83/151 (54.97%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 93 PAACSPLVPNPAHHRLTAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 P CS T +V + PP+ THSMPPEK+EVF SL WA N+L LKPVEKCWQP FLPDP F +QV+ LRER +PDDYFVVL+GDMIT+ A+PTYQTMINTLDGVRDETGA+ P AIW Sbjct: 17 PFPCSSARSERVFMASTIHRPSVEVGSVKKAFTPPREVHVQVTHSMPPEKIEVFDSLRDWAAQNLLVHLKPVEKCWQPTDFLPDPAS--EGFDEQVKELRERCKEIPDDYFVVLIGDMITEEALPTYQTMINTLDGVRDETGATVTPWAIW 165 HSP 2 Score: 30.0314 bits (66), Expect = 1.077e-40 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 167 RAWTAEENRHGDLLNKYLYLSGRVDMKQIEK 197
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_BRANA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.829e-40 Identity = 84/159 (52.83%), Postives = 104/159 (65.41%), Query Frame = 3 Query: 78 TSTKPPAACSPLVPNPAHHRLTAASSTVRFRQISAVAAPPKPKT-------HSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 +S +PP + +P L ++S + +++ ++ P P HSMPP+K+E+FKS+E WA N+L LK VEK WQPQ FLPDP F DQVR LRER LPDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS AIW Sbjct: 17 SSARPPIST---FRSPKFLCLASSSPALSSKEVESLKKPFTPPKEVHVQVLHSMPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFLPDPAS--DGFEDQVRELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIW 170 HSP 2 Score: 30.4166 bits (67), Expect = 1.829e-40 Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 514 PAHGLFGNRARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 P RA T EENRHGDL ++ + ++ M IEK Sbjct: 164 PTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEK 202
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_GOSHI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.383e-40 Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 195 PKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 P THSMPP K+E+FKSLE WA NN+L LKPVEKCWQP FLPDP F +QV+ LRER +PDDYFVVLVGDMIT+ A+ TYQTM+NTLDG RDETGAS P AIW Sbjct: 58 PVQITHSMPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFLPDPNS--DGFHEQVKELRERAKEIPDDYFVVLVGDMITEEALSTYQTMLNTLDGTRDETGASLTPWAIW 168 HSP 2 Score: 28.8758 bits (63), Expect = 2.383e-40 Identity = 14/31 (45.16%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IE+ Sbjct: 170 RAWTAEENRHGDLLNKYLYLSGRVDMRQIER 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_ELAGV (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 5.270e-40 Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 207 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 THSMPP+K+E+FKSLE WA NN+L LKPVEKCWQPQ FLPDP+ F ++V+ LRER+ +PD Y+V LVGDMIT+ A+PTYQTM+NTLDGVRDETGAS A+W Sbjct: 59 THSMPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFLPDPSS--EGFHEEVKELRERSKEIPDGYYVCLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAVW 165 HSP 2 Score: 30.0314 bits (66), Expect = 5.270e-40 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 167 RAWTAEENRHGDLLNKYLYLSGRVDMKQIEK 197 The following BLAST results are available for this feature:
BLAST of DY270367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270367 ID=DY270367; Name=DY270367; organism=Citrus clementina; type=EST; length=1314bpback to top |