DY270379

Overview
NameDY270379
Unique NameDY270379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY270379_ssr705 microsatellite DY270379_ssr705:705..716. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 482.641 bits (1241), Expect = 1.449e-135
Identity = 245/324 (75.62%), Postives = 282/324 (87.04%), Query Frame = 2
Query:    2 NAYPKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            +A+ K  TFGQRSKLSIQEQR SLPI+KLK ELIQAVHDNQVL++IGETGSGKTTQ+ QYLAEAGYTTKGKIGCTQPRRVAA SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT+IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTI+TDVLFGLLK+L+KRR DLRLIVTSATLDAE+FSGYFFNCNIF+IPGRTFPV+I Y++Q  TDYLD+ALITVLQIH+ EPEGDIL FLTG EEID  C+SL E++K LGK+VPE+ +L V  ALP+E+ ++ I + PP G  K +    +     T +G + +++PGFA+QN+
Sbjct:  492 DAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR-IFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNV 814          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 2.405e-114
Identity = 202/317 (63.72%), Postives = 261/317 (82.33%), Query Frame = 2
Query:   23 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            ++G+++++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIGCTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+T+IKYMTDGMLLRE LID +L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+   IF+IPGRT+PV+I Y+++  TDYLD++LITV+QIH+ EP GDIL FLTG EEID  CE L E++K+LG DVPE+ +L V  ALP+E+ T+ I +  P G  K +    +     T +G + +++PGF +Q +
Sbjct:  573 SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR-IFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 888          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 2.405e-114
Identity = 202/317 (63.72%), Postives = 261/317 (82.33%), Query Frame = 2
Query:   23 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            ++G+++++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIGCTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+T+IKYMTDGMLLRE LID +L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+   IF+IPGRT+PV+I Y+++  TDYLD++LITV+QIH+ EP GDIL FLTG EEID  CE L E++K+LG DVPE+ +L V  ALP+E+ T+ I +  P G  K +    +     T +G + +++PGF +Q +
Sbjct:  549 SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR-IFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV 864          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.752e-110
Identity = 195/314 (62.10%), Postives = 253/314 (80.57%), Query Frame = 2
Query:   26 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQ 967
            +G+ +  SI+EQR SLPIF L+   +QAV ++Q+L++IGETGSGKTTQ+AQYLAEAGY T+GKIGCTQPRRVAA SV+KRVAEEFGC+LG+EVGYAIRFEDCT P+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI+TDVLFGLLKQ ++RRP+L++++TSATL+AE+FS YF N  +F IPGRTFPVDI Y++    DYLD++LITV+QIH+ EP GDIL FLTG EEID  C+ L E++K+LG +VP++ +L V  ALP+E+ TK I    P G  K +    +     T +G + +++PGF++Q
Sbjct:  493 YGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTK-IFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQ 805          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 2.411e-106
Identity = 192/317 (60.57%), Postives = 247/317 (77.92%), Query Frame = 2
Query:   23 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            T+G+R+ LS+ EQR SLPIF LK  L++A+ DNQ+L+++GETGSGKTTQ+ QY  EAG   +GKIGCTQPRRVAA SVAKRVAEE+GC+LG +VGY IRFEDCT  DT+IKYMTDGMLLRE LID +LS YS+IMLDEAHERTI+TDVLFGLLK   ++RP+L+LI+TSATLD+ +FS YF    IF+IPGRTFPV+I Y+R+  +DYL++A ITV+QIH+ EP GD+L FLTG EEID  CE L E++K++G DVPE+ +L V  ALP+E+ T+ I +  P G  K +    +     T +G F +++PGF +Q +
Sbjct:  524 TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTR-IFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKI 839          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 3.849e-104
Identity = 193/317 (60.88%), Postives = 243/317 (76.66%), Query Frame = 2
Query:   23 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQN 970
            ++G+R+ LS++EQR  LP+FKL+ + ++AV  NQ+L+L+GETGSGKTTQ+ QYLAE GYT+  K IGCTQPRRVAA SVAKRVAEE GCR+GEEVGY IRFED T   T IKYMTDGML RE L+D  LS+YSVI+LDEAHERT+ TDVLFGLLK  V +RPDL+LIVTSATLDAERFS YF+ C IF+IPGR++PV+I Y++Q   DYLD+AL+TV+QIH+ E  GDIL FLTG EEID  CE L E+ K LG  +PE+ +L V  ALP+EI ++ I    P GG K +    +     T +G + +++PGF +Q+
Sbjct:  494 SYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSR-IFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQS 809          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.855e-99
Identity = 178/324 (54.94%), Postives = 242/324 (74.69%), Query Frame = 2
Query:    2 NAYPKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            N   ++ ++G+R+ L I  QR++LP++ +++ELIQAV DNQ L+++GETGSGKTTQ+ QYL E G++  G IGCTQPRRVAA SVAKRVAEE GC++G +VGY IRFED TGPDT IKYMTDGML RE L+D  +S+YSVIMLDEAHERT+ TDVLF LLK+   +RP+L++IVTSATL++ +FS YF NC I +IPG+TFPV++ YS+    DY+++AL  V+ IH++E  GDIL FLTG EEID  CE L +++K LG  + E+ +L V  ALP+EI +K I    P+G  K ++   +     T +G + +++PGFA+ N+
Sbjct:  460 NRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSK-IFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINI 782          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX16_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.855e-90
Identity = 163/313 (52.08%), Postives = 224/313 (71.57%), Query Frame = 2
Query:   35 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            ++K++IQE R+SLP++  + +LI AV + QVLI++GETGSGKTTQ+ QYL EAG++  GKIGCTQPRRVAA SVA RVAEE GC+LG EVGY+IRFEDCT   T+++YMTDGML+RE L   +L+ YSV+++DEAHERT++TD+LFGLLK + + RPDL+L+++SAT+DAERFS YF     F+IPGR + V  +Y++    DYLD+A++TVLQIH+ EP GDIL FLTG EE+D   E L  + + LG  + E+ +  +   LP ++  K I    P    K +    +     T +G   +++PGF +Q M
Sbjct:  455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAK-IFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKM 766          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX16_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4 PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 2.678e-89
Identity = 168/318 (52.83%), Postives = 233/318 (73.27%), Query Frame = 2
Query:   23 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQN 970
            T  ++ K+SI+E R+SLP++  ++  I+AV ++QVLI+ GETGSGKTTQL QYL EAG+   GK IGCTQPRRVAA SVA RVA+E GC+LG +VGY+IRFEDCT   T++KYMTDGMLLRE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + R DL+L+++SATLDAE+FS +F +  IF IPGR FPVDI Y++    DY+D+A++T++QIH+ +P  GDIL FLTG EEI+   E+L E+ KALG  + E+  L V   LP+++  K I    P+   K +    +     T +G   +++PGF++QN
Sbjct:  348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAK-IFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQN 664          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX16_PANTR (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 1.125e-87
Identity = 164/312 (52.56%), Postives = 221/312 (70.83%), Query Frame = 2
Query:   35 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG-KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQ 967
            + K SIQ  RRSLP+F  + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT   T+++YMTDGMLLRE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D  RFS +F +  +F IPGR FPVDI Y++    DYL++ +++VLQIHV +P GDIL FLTG EEI+  CE L ++ + LG  + E+ VL +   LP+++  + I    P G  K +    +     T  G   +L+PGF +Q
Sbjct:  390 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQAR-IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQ 700          
The following BLAST results are available for this feature:
BLAST of DY270379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHX8_ARATH1.449e-13575.62Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX8_MOUSE2.405e-11463.72ATP-dependent RNA helicase DHX8 OS=Mus musculus GN... [more]
DHX8_HUMAN2.405e-11463.72ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN... [more]
DHX8_DICDI2.752e-11062.10ATP-dependent RNA helicase dhx8 OS=Dictyostelium d... [more]
MOG5_CAEEL2.411e-10660.57Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP22_SCHPO3.849e-10460.88Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
PRP22_YEAST2.855e-9954.94Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
DHX16_DICDI1.855e-9052.08Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX16_CAEEL2.678e-8952.83Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX16_PANTR1.125e-8752.56Putative pre-mRNA-splicing factor ATP-dependent RN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YG24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270379 ID=DY270379; Name=DY270379; organism=Citrus clementina; type=EST; length=983bp
GAATGCATACCCTAAAGCATTCACTTTTGGACAAAGGTCAAAGCTCTCCA
TCCAGGAACAGAGGCGGAGCTTGCCAATTTTCAAATTGAAGAATGAACTA
ATCCAGGCTGTTCATGATAACCAGGTCCTAATACTCATTGGTGAGACTGG
TTCAGGTAAGACAACCCAATTGGCACAGTATCTTGCAGAGGCTGGTTACA
CTACGAAGGGCAAGATTGGATGTACCCAGCCCCGTAGGGTGGCTGCAACT
TCTGTGGCCAAGAGGGTTGCTGAAGAGTTTGGCTGTCGTTTGGGAGAGGA
GGTTGGTTATGCCATTCGATTTGAGGATTGTACTGGACCAGATACTCTGA
TCAAGTACATGACTGATGGGATGTTGCTTAGGGAGATTTTGATTGATGAG
AATCTTTCTCAGTATTCTGTCATTATGCTTGATGAAGCTCATGAGAGGAC
AATCAACACTGATGTTCTTTTTGGGTTACTTAAGCAGCTTGTGAAACGGA
GACCTGACCTACGCCTGATTGTGACATCTGCCACATTGGATGCAGAGAGA
TTTTCTGGATATTTCTTCAACTGCAACATCTTCAGTATTCCAGGGAGAAC
ATTTCCAGTTGATATAAACTACTCCAGACAGGAGGTAACTGATTATCTAG
ATTCAGCATTGATCACAGTCTTGCAGATCCACGTTGATGAACCTGAAGGT
GATATTCTTTCTTTCTTGACAGGGTCAGAGGAGATAGATTTTGGCTGTGA
ATCCCTTTGCGAGAAAATAAAAGCGCTGGGTAAAGATGTTCCTGAAATGG
GTGTTTTAACCGTTTAACGTGCGCTTCCAAATGAAATTTCAACCAAAAAT
ATTTTAAACCGCCCCCCCCGGGGGGGAGAAAAGGGTTTGTGGCCACCAAA
ATTGGTGAGGCCCCTTTGAACATTTAATGGAAAATTTTTGTTATTGAATC
CCGGGTTTGCACAACAAAATATGCCATAATTCA
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