DY270383

Overview
NameDY270383
Unique NameDY270383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1248
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3598 contig Ccv1_Contig3598:1..1248. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL1_ARATH (Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 3.865e-78
Identity = 169/310 (54.52%), Postives = 204/310 (65.81%), Query Frame = 1
Query:  202 MEVELPRLGNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDARQNHFS--SRLQPTGIPASKTLSWHLALGN*IPIGRGLTRALKSL*ETQNF----GIFPSVEKGKEKTEKVPRGLRPINRGRAWSQGSGANFRGLPQGRTG----RATKTLAPFQTLGQPPGGEWNFAPVRQQERPHSLSFRKTQQLPRLK 1101
            ME E+  + N AMT DEVSMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQKQMVLDNLKDY V+ALVNAVDHLGTVA KLTDL + Q SD+STME+R SC++Q+LLTC+TY +KEGLRQQQLLA IP HHKHYILPNSVNK+VHFSP   TD RQNH+   SRLQP+  PASK+LSWHL       + +G +    S  +++ F    G+F  +   +    K P               +G+   G+P   T        K L   ++L   P  E   APVR   +    +F   Q+ P+LK
Sbjct:    1 METEISGMDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKEGLRQQQLLAVIPLHHKHYILPNSVNKRVHFSPLRRTDTRQNHYQAISRLQPSDAPASKSLSWHLGSETKSTL-KGTSTVAPSSKDSKAFSKTSGVFHLLGDDENIANKKPL--------------AGSQVSGVPAASTAHKDLEVPKLLTAHRSLDNNPRREIIQAPVR--TKSVLSAFFVKQKTPKLK 293          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL1_ORYSJ (Probable protein ABIL1 OS=Oryza sativa subsp. japonica GN=Os01g0622700 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 7.077e-64
Identity = 124/176 (70.45%), Postives = 143/176 (81.25%), Query Frame = 1
Query:  226 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDARQNHFSSRLQPTGIPASKTLSWHLA 753
            G    T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+C+NQ++LTCQTY++KEG+RQQQ+     RHHKHYI+P   NK++     + TDA      SR +P   P++KTL WHLA
Sbjct:   27 GPAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTATRHHKHYIVPTLANKRMQAFSEMQTDA---DIDSRPRP--YPSAKTLFWHLA 197          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL4_ORYSJ (Probable protein ABIL4 OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.605e-58
Identity = 115/174 (66.09%), Postives = 143/174 (82.18%), Query Frame = 1
Query:  241 TFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDARQNHFSSRLQPTGIPASKTLSWHLALGN 762
            T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVL+NLKDYAVRA+VNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+ +NQ++LTCQ ++++ GLRQQ++     +HHKHYILP++ +K+   + R+ TD  Q+      +P   P++KTLSWHL+  N
Sbjct:   23 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVVNAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDRAGLRQQKIGGTTFKHHKHYILPSTGHKRTQ-AARLQTDNGQDS-----KPKPYPSAKTLSWHLSSEN 190          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.817e-35
Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 1
Query:  229 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 627
            + A  +DEVSM++S  F   LQ+LKNLR QLYSAAEY E SY   ++KQ+V++ LKDYAV+ALVN VDHLG+V YK+ D ++++  +VS  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK YILP
Sbjct:    5 HEASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKALVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYILP 137          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.098e-35
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 1
Query:  235 AMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNSVNKK 645
            A  +DE+SM++S  F  +L++LKNLR QLYSAAEY E SY + EQKQ+V++ LKDYA++ALVN VDHLG+V YK+ D ++++  +V+  ELRVSC+ Q+L  CQ Y + EG  QQ L+   P+ HK Y LP+   K+
Sbjct:   13 ASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETLKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDTPKFHKRYFLPSGEIKR 149          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL2_ORYSJ (Putative protein ABIL2 OS=Oryza sativa subsp. japonica GN=Os01g0551800 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.541e-29
Identity = 61/134 (45.52%), Postives = 93/134 (69.40%), Query Frame = 1
Query:  226 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 627
            G  + T +EV M+ +  F   +++LK L+ QLYSAAEY E +Y   + KQ V++NLK+Y+V+ALVN VDHLG++++K++ L++Q+  +V    LRVSC++Q+    Q   +KEGL QQ L+   P++HK YILP
Sbjct:   17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKEGLSQQSLVITAPKYHKRYILP 150          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL4_ARATH (Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.919e-27
Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 1
Query:  229 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILP 627
            +++   DE+ M+++  F + L++LKNLR QLYSAAEY E SY  +E K+ V++ LK+YA +A+VN VDHLG+V+ K    L   ++  ST  LR+S + Q++  C+ Y  K G  Q  LL   PRHHK Y  P
Sbjct:   12 HQSSNHDELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNTVDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQYPRHHKRYFFP 144          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL3_ORYSJ (Probable protein ABIL3 OS=Oryza sativa subsp. japonica GN=Os01g0236400 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.036e-27
Identity = 65/155 (41.94%), Postives = 99/155 (63.87%), Query Frame = 1
Query:  247 DEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRHHKHYILPNS--VNKKVHFSPRVPTDARQNHFSSRL 705
            D  S++    F  +L++L+NLR QLYSAAEY E  Y ++ QK  V+ +LKDY V ALV+ VDHLG V+YK+ +L+++++ +V+  E RVS + Q++  CQ   ++EG  QQ LL   P++H+ YILP +  V   +H     P  +RQ H S ++
Sbjct:   26 DMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVSTVDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLIRAPKYHRRYILPGTDIVESAIHPVSEPPRYSRQ-HMSRKM 179          
BLAST of DY270383 vs. ExPASy Swiss-Prot
Match: ABIL5_ORYSJ (Probable protein ABIL5 OS=Oryza sativa subsp. japonica GN=Os01g0760900 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.036e-14
Identity = 40/100 (40.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  256 SMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYS 555
            S+  +  F  AL+ELK+LR QL+  A+ CEK++L +E+K+++L++ K Y   A+V  +DHLGTV+ KL   L Q+  +++  E +++ + Q+LLTC+ Y+
Sbjct:   31 SLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYA 129          
The following BLAST results are available for this feature:
BLAST of DY270383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ABIL1_ARATH3.865e-7854.52Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=... [more]
ABIL1_ORYSJ7.077e-6470.45Probable protein ABIL1 OS=Oryza sativa subsp. japo... [more]
ABIL4_ORYSJ2.605e-5866.09Probable protein ABIL4 OS=Oryza sativa subsp. japo... [more]
ABIL2_ARATH1.817e-3554.89Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH3.098e-3551.82Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
ABIL2_ORYSJ2.541e-2945.52Putative protein ABIL2 OS=Oryza sativa subsp. japo... [more]
ABIL4_ARATH6.919e-2744.36Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=... [more]
ABIL3_ORYSJ9.036e-2741.94Probable protein ABIL3 OS=Oryza sativa subsp. japo... [more]
ABIL5_ORYSJ1.036e-1440.00Probable protein ABIL5 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YH06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270383 ID=DY270383; Name=DY270383; organism=Citrus clementina; type=EST; length=1248bp
TTAATTCCCACTTTTCGGAATCGCTTTCACTTCACTCATCATCCTTTCTT
AGCCCTCTTTTATTCCTTTCTCTATTATTAGATTAACTATCTCACCAAAA
CCCAACCTCAAATCTAAATTGTTAATGATAGTAATCTCGTTTGTGAATTA
TTTTAGTTTTATGATTTGAAACTTTAGGGTTTTGTTTGATCGAGCTGAGA
GATGGAAGTGGAGCTACCGAGGCTGGGTAATCGTGCCATGACTTTCGATG
AGGTCTCCATGGAGCGTAGCAAAAGCTTCGTCAAAGCTTTGCAGGAGCTC
AAGAACTTAAGACCTCAACTGTATTCAGCTGCAGAATATTGTGAAAAGTC
TTATCTTCACAGTGAGCAGAAACAAATGGTACTTGATAACCTAAAAGACT
ATGCTGTAAGAGCGCTGGTCAATGCTGTTGATCACCTTGGCACTGTGGCT
TACAAGTTAACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCAACCAT
GGAGCTAAGGGTTTCTTGTATGAACCAGAAACTTCTTACATGCCAAACCT
ACTCAAATAAAGAAGGTCTCCGGCAGCAACAGTTATTGGCGTTCATCCCA
AGACATCACAAGCATTACATTTTACCAAATTCTGTGAACAAGAAGGTACA
TTTTAGTCCACGTGTACCAACTGATGCTAGGCAAAATCATTTTTCATCAC
GTCTTCAACCCACAGGAATCCCTGCTTCTAAAACTCTTTCCTGGCATTTA
GCCCTCGGAAACTAAATCCCCATCGGAAGGGGACTCACCAGGGCTTTGAA
AAGCCTCTGAGAAACGCAAAACTTCGGGATTTTTCCATCCGTTGAAAAAG
GAAAAGAAAAAACCGAAAAAGTCCCCCGGGGGCTCCGCCCAATTAACAGG
GGGAGGGCCTGGTCTCAGGGCTCTGGGGCAAACTTTCGGGGGTTGCCCCA
GGGACGCACGGGGAGGGCAACAAAAACTTTGGCACCATTTCAAACTCTTG
GACAACCCCCGGGGGGGGAGTGGAACTTCGCCCCTGTCCGCCAACAAGAG
AGGCCCCATTCCCTTTCCTTCCGCAAAACGCAACAACTTCCACGACTTAA
GGGGCGGGTTAAATGTTCAAGAGGTAATGCATACAAGGGACCAAAGCCAA
ACTAGTGGCTTCCTAGTATTGGGATATGTTGAGTACGCCGGGCAACCTAG
CGCCGCAACTAGAGCGATAACGGCGTGCGACCACCCCCCGATCAAAGC
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